Gene Avi_6072 details

Gene Information

• Locus tag: Avi_6072
• Symbol: kdpC
• ID: 7380893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: -
• Start bp: 1091824
• End bp: 1092399
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643649570
• Product: K+-transporting ATPase C subunit
• Protein accession: YP_002547795
• Protein GI: 222107004
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2156] K+-transporting ATPase, c chain
• TIGRFAM ID: [TIGR00681] K+-transporting ATPase, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.322844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTCCC ATCTTCGTCC CGCCATCACC ATGACCGTGC TGTTTACCGG TCTTTGCGGC 
CTCGCCTATC CGCTCGCCAT CACCGGCGTT GCGCAAGCGG TGCTTCCCGC CCAGGCCAAT 
GGCAGCATTG TCACGAAAGG CGATGCCGTG GTCGGCTCGG CCCTGATCGG CCAAGCCTTC 
ACGTCGCCAC GCTATTTCGC CTCCCGCCCA TCGGCCACCA GCAATTCGCC CTATAATCCG 
CTGGCGTCAG GCGGCACCAA TCTTGGGGCC ACCTCGCAAA AGCTGAAGGA CCAGATTGCC 
GCCGCTGTCA CCGCCTGGCA AGCGAACGGT CGCAGCGGGC CAGTGCCTGC TGATGCCGTC 
ACGTCGTCCG CTTCCGGGCT TGACCCGGAT ATCTCGCCTG AAAATGCTCG CCAACAGGTG 
GCGCTGGTTG CCAAAGCCCG CAACATGCCG GAAAAGGATG TGGCAGCGCT GGTGGAAGCC 
CAGGTGCAAC CGCGACTTCT TGGCGTGATC GGTGAGCCAA GGGTCAATGT ATTGCGGCTG 
AACATGGCGC TCGATGCGGC GGGAGCCACT CAATAA 

 

Protein sequence

MLSHLRPAIT MTVLFTGLCG LAYPLAITGV AQAVLPAQAN GSIVTKGDAV VGSALIGQAF 
TSPRYFASRP SATSNSPYNP LASGGTNLGA TSQKLKDQIA AAVTAWQANG RSGPVPADAV 
TSSASGLDPD ISPENARQQV ALVAKARNMP EKDVAALVEA QVQPRLLGVI GEPRVNVLRL 
NMALDAAGAT Q