Gene Avi_6065 details

Gene Information

• Locus tag: Avi_6065
• Symbol: arsB
• ID: 7380887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 1084941
• End bp: 1086035
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643649564
• Product: arsenical pump membrane protein
• Protein accession: YP_002547789
• Protein GI: 222106998
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0798] Arsenite efflux pump ACR3 and related permeases
• TIGRFAM ID: [TIGR00832] arsenical-resistance protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAT TCGAACGTTA TCTGACGGTC TGGGTTTTCC TCTGCATTCT CGCAGGGATC 
GCGCTTGGAC ATGCCATGCC CGGTGTGTTT CAGGTCATCG GTGCCGCCGA AATCGCCAAG 
GTTAATATCC CGGTTGCGGT GCTGATCTGG TTGATGATTA TTCCGATGTT GATCAAGATC 
GATTTCGCAG CGCTTGGGCA GGTTGGTCGT CACTGGCGCG GCATCGGTGT TACGCTGTTC 
ATCAATTGGG CGGTCAAGCC CTTTTCCATG GCGCTGCTTG GCTGGCTGTT TATCGGCACC 
CTGTTTCGGC CCTTGCTTCC GGCTGTGCAG ATCGACTCCT ATATTGCCGG ACTGATCATT 
CTGGCTGCGG CACCCTGCAC GGCCATGGTC TTCGTCTGGT CTAACCTGAC AAAGGGCGAG 
CCTCATTTTA CCCTTTCCCA GGTCGCATTG AACGATGCGA TCATGGTCGT GGCCTTTGCG 
CCCATCGTCG GCCTGTTGCT TGGCCTGTCC GCCATCACCG TACCTTGGGA TACCCTGGTG 
TTTTCGGTGG TGCTCTACAT CATCCTTCCA GTGATCGCGG CGCAGATTTT GCGGCGCAGT 
CTGACCTCGT CCGGCTCTTC GGCCTCGCTC GACCGTTTGC TGAAGGTGCT GCAACCGATG 
TCGCTTGTAG CGTTGCTGGC CACGCTGGTA TTGCTGTTCG GGTTCCAGGG CGAGCAGATC 
ATTGCACAAC CGACCATTAT CGCCCTTCTT GCCGTGCCGA TCCTCATCCA GGTCTATTTC 
AATTCGGGCC TCGCCTATCT GCTGAACCGT ATGACGGGTG AGCAACATTG CATTGCCGGT 
CCTTCAGCCC TGATCGGCGC GTCGAATTTC TTCGAGCTGG CGGTTGCCGC TGCCATCAGC 
CTGTTCGGCT TCAATTCCGG TGCCGCCCTT GCGACGGTCG TCGGCGTTCT CATCGAAGTG 
CCGGTCATGC TGTCGGTCGT CTGGATCGTC AATCGCAGCA AGGGTTGGTA CGAGCGCGGC 
ACGGCGGTGC AGGCGGCTGG TCTTTCCCAA GCCAATAGTC ATGAAACAAA CACCCAGGAG 
AAGGTCCGGT CATGA 

 

Protein sequence

MSKFERYLTV WVFLCILAGI ALGHAMPGVF QVIGAAEIAK VNIPVAVLIW LMIIPMLIKI 
DFAALGQVGR HWRGIGVTLF INWAVKPFSM ALLGWLFIGT LFRPLLPAVQ IDSYIAGLII 
LAAAPCTAMV FVWSNLTKGE PHFTLSQVAL NDAIMVVAFA PIVGLLLGLS AITVPWDTLV 
FSVVLYIILP VIAAQILRRS LTSSGSSASL DRLLKVLQPM SLVALLATLV LLFGFQGEQI 
IAQPTIIALL AVPILIQVYF NSGLAYLLNR MTGEQHCIAG PSALIGASNF FELAVAAAIS 
LFGFNSGAAL ATVVGVLIEV PVMLSVVWIV NRSKGWYERG TAVQAAGLSQ ANSHETNTQE 
KVRS