| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6045 |
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| Symbol | impH |
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| ID | 7380871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1063957 |
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| End bp | 1064967 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649548 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547773 |
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| Protein GI | 222106982 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCC AGATCAAACC CAATGAGGAT AAGCTGGCCC GCCTGCTGGA GCAGGACCCC
GGCCATTTTG AATCGACCAC GGCATTTCGG GTGGCACAGC ACCTGTCATC GGGAACGGAG
CTGGAGGTCG GGGCCCATTC CGGCATTCAG CCAGCCCCTC TTGCCGTCAG CGGTTTTCGC
CGCAAGTTGC AGGGCAATGT CGTCAAATCG GCTTTTGCGC CGCTGGTCGG GCCGCTTGGC
GCGCTGCCGC CGGAATATAA CGAATTGCTG CTGCGCGAAG AGCGTCGGCG TTCCCGCGCC
TTGATCAGCT TTCTCAACCT GTTTGCCATC CGGTTTTCGG AACTGTTTGT GGCGGCCTGC
GAGAAATACC GGCTGGCACG GCGGCTGCGC TGGAGTGCCA CCAAGGAACA AAACACCTTC
CGCAAGGTGT TGCTATCGCT GACCGGCTTC GGCACCGCCG GACTGGTGGA AAAGGCAGGC
ATCAATGAAG ATGTGATCCT GCGGTTTTCC GGATTTTTTG CCGACCGTAC CCGCAATGTC
GCCAGTCTTC GAGCCATGCT GGAGGAGTTT ACCGGCATGG CGGTGGCGAT TGAGCAGTTT
CGTCCGCGCT GGGTCTCCAT TCCGTCGGCA GAGTTGAGCC AGATGGGCAA GGGGTCCGGC
CCAAGACTCG GCGTCAACGC CATGGCGGGT GCATCCGTCA TGGACCGGAG CGGAGCACTG
AGGCTGGTCA TCGGTCCGGT TGGCTATGAC GATTATATCA GCCTATCGCC TGGCAAGCCG
CGTCTTGCGG AAATCTTCGC CCTCACCCGC CTGTTTATCG GCAACGGCTT TGATATCGAT
GCCCAGGTCG TCCTGAAAAA AGAAGACATT CCGTTTTGTC AGATGGGGTC TGCGACCATG
CCTGCCCGGC TCGGCTGGAA CAGCTGGGCG CGGCTGGCCC CAGCAAGCAC TGACAGCCGC
GATGCCGTGG TTACCGAATA TCAGGCCATG CCGCAGGGAG GTCTGGCATG A
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| Protein sequence | MNIQIKPNED KLARLLEQDP GHFESTTAFR VAQHLSSGTE LEVGAHSGIQ PAPLAVSGFR
RKLQGNVVKS AFAPLVGPLG ALPPEYNELL LREERRRSRA LISFLNLFAI RFSELFVAAC
EKYRLARRLR WSATKEQNTF RKVLLSLTGF GTAGLVEKAG INEDVILRFS GFFADRTRNV
ASLRAMLEEF TGMAVAIEQF RPRWVSIPSA ELSQMGKGSG PRLGVNAMAG ASVMDRSGAL
RLVIGPVGYD DYISLSPGKP RLAEIFALTR LFIGNGFDID AQVVLKKEDI PFCQMGSATM
PARLGWNSWA RLAPASTDSR DAVVTEYQAM PQGGLA
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