Gene Avi_6044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6044 
SymbolimpI 
ID7380870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1062701 
End bp1063960 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID643649547 
Productforkhead-type phosphopeptide-binding protein 
Protein accessionYP_002547772 
Protein GI222106981 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGG AACTTCGCCC CGAAAAACCA GTTACCAAGG GCCAGACCAC ATGGACACTG 
GACTATGGTC GCCGGACCAT TGGCCGCGCC CCTGCCTGCG ATTGGCAAGT GACGGACAAT
GAATGTCGCG TCTCGAAACT GCATTGCACC ATCAGCCGGG ACCGGGACGG TTACGTGCTG
AGCGACCAGA GCGCCAATGG CACATTGGTC GATGGCAAGC TGCTGCTGGA AGGCGATACG
ATCCGGCTCA AGCACGGCGC CAGCATCGAT GTGCGCGGCT ACCGGTTTAC CGTTTCAATT
ACCGGTGAGG CGACGCCTGA GGCGGTCGAT CCCGATCCAA CCATGCCGGT TAGCAGTGAG
ACGCTGACGA TTTCCTCGAT CCTTGCCGAT ATCGCCCCGA ATGGCACCAC CGCCCGCGGC
CTTCTGGGAG ACCGGCAGGT GGAGGAACCG TGGAAGCAAC CCCGGCCATC AGAGCGAGGC
ATGTCTGGAG GGGCCACACA ATCTGACCGT CGGGCGGACA AGGAAAAGAG CTTTACCCGT
CATGTCGATA TCGGCTGGAG CGGTCCGCCG CAGACCGATG GCATGAAACC CGTCTTGCCG
GACAATTGGT TCGATGAGGA TGCCGGTGGA AGCGCCATGG AACATCTGGC CGCGCCGAAA
ACCTTCGTGA CCATCGCGCC CCCCGTTCGC CGTTCGCCGC AGGAATTGCC CCCTCCGCAA
GAGGAGCGGT CAAAACCGCA GGACGAATTT GACGCGGTGT TCGCCGATCC TGAGGATCAG
GAGCCGGATG CGCGACAGAG CCCATCGGCT TCAGATCTGC AAGCGGAGCG GATGATGGCG
GCGCTCTCCC GCGCCCAAGA GGCTCTGGCC GAAAGCATCG CGGCCTTCGA CCTGCCAGGT
GATGCCGTGC CTTCCCTGTC GAGCAGTAAC GACACCGATC TTGCCGCCCG GCTTGAAGCC
TTTGCCGGAC AGCAGGAGGC CTTCGCGGCG ATTTTGCAAA CCATGATGCA GGCGGCAGGC
CGGTCGCTGG ACCCACGCCT GCTGGAGGCC AAGGTAGACG CAAACTCGCC GGTGCGGCTG
CCTTTCCTTG CCGAGCGCGA CTACTGGGCG GCCTATCGGC AATTGTTTCA GGCCGAGGGC
CGTATTCTTT CATTCAGGGA TTTCATGCGT CGCGCCGCCA TGGGCGAGCA GGCCGAAGAG
CCAGCCGTAC CGGTTCAAGC CGACAGAGTA ATGGGGGTAG AAACAACCGA TGAGACATGA
 
Protein sequence
MKLELRPEKP VTKGQTTWTL DYGRRTIGRA PACDWQVTDN ECRVSKLHCT ISRDRDGYVL 
SDQSANGTLV DGKLLLEGDT IRLKHGASID VRGYRFTVSI TGEATPEAVD PDPTMPVSSE
TLTISSILAD IAPNGTTARG LLGDRQVEEP WKQPRPSERG MSGGATQSDR RADKEKSFTR
HVDIGWSGPP QTDGMKPVLP DNWFDEDAGG SAMEHLAAPK TFVTIAPPVR RSPQELPPPQ
EERSKPQDEF DAVFADPEDQ EPDARQSPSA SDLQAERMMA ALSRAQEALA ESIAAFDLPG
DAVPSLSSSN DTDLAARLEA FAGQQEAFAA ILQTMMQAAG RSLDPRLLEA KVDANSPVRL
PFLAERDYWA AYRQLFQAEG RILSFRDFMR RAAMGEQAEE PAVPVQADRV MGVETTDET