Gene Avi_6032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6032 
Symbol 
ID7380859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand- 
Start bp1043045 
End bp1043698 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content56% 
IMG OID643649534 
Productmembrane protein 
Protein accessionYP_002547765 
Protein GI222106974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAG AAGTCGGCAT TATCGATCCG GCCAGGGTGG CGCTTGCCAA TGCCGCAGCG 
CTGTCGCTGG TTGCCTCTCA ACTCCCTGCA CTTTGGCGTC ATCCCCTGAT GCTCCCTAAA 
ACGGCGCTTG CCGCCATTGC TTTCTCAATC ATGATGCAGG TCTGGCATCT GCCAGTCGGG 
CCATCGGAAT TGCACCTGAT CGGTGCGACC ACCATTTATC TTCTCTTCGG CTTTACGCCC 
GCCATACTGG GCTTTGCGCT TGGCCTCGTC TTACAGGCAT TTCTATTCGA GCCGGGGGAC 
ATTCCTCATC TCGGCGTCAA CGCCCTATCG CTGATGCTGC CGATGATGGT GGTGCATTAT 
ACCCTTGGGA AGCGTCTTTT TTCCGGCGAA ATCGGCAAGC GCTTCAATCT CGCCAGAGTA 
TTGGGGCTTG ATGCCACCTA TTATGCCGGG GTGTCGGCCA TGGTCGGTTT CTGGCTGGCT 
ATTTCTAACG ACGGGCTTGC CTTTGCCGAT TGGGGACGCT GGGTCATTGC TTATGCACCG 
GTATTTGCCA TTGAGGCATG CATCACGTTT ATCATCGTCC TCGCCGTACG GCGGATACGG 
CACCTTCGCG TGACCAGCCA GATCACCGAG ATCGACCGTT TGACCTTTGC CTGA
 
Protein sequence
MHIEVGIIDP ARVALANAAA LSLVASQLPA LWRHPLMLPK TALAAIAFSI MMQVWHLPVG 
PSELHLIGAT TIYLLFGFTP AILGFALGLV LQAFLFEPGD IPHLGVNALS LMLPMMVVHY 
TLGKRLFSGE IGKRFNLARV LGLDATYYAG VSAMVGFWLA ISNDGLAFAD WGRWVIAYAP 
VFAIEACITF IIVLAVRRIR HLRVTSQITE IDRLTFA