| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6025 |
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| Symbol | poxA |
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| ID | 7380852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1033030 |
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| End bp | 1034103 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649527 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002547758 |
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| Protein GI | 222106967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.858577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGAA TGAGCGAAAA GCGCCCCTCC GCCTCCCCTT GGTGGACACC GCGGGTCCAT
GCCGACCGCC GCCCCTTCCT GCTTGGCCGC AATGCCATCC AGGCCGCCCT GCGGCTCTAT
TTCAGCCGTA ACGACTTCCT GGAGGTCGAC GCGGCAACCT TGCAAGTGTC GCCCGGCAAT
GAGGCGCATC TGCACGCCTT CGCAACAAGC GCTATTGGCA ATGATGGCCA ATCGCATCCT
CTTTACCTGC ATACATCACC GGAATTTGCC TGCAAGAAAC TGCTGGCCGC CGGCGAATCT
CGCATTGCCT GCTTTGCCCA TGTCTACCGC AACCGGGAGC GCGGCCCCCT GCACCACCCG
GAATTTACCA TGCTGGAATG GTATCGCGCC GGGGAAACCT ATGAGCGACT GATGGCCGAT
TGCGCCGCCA TCCTGGCCCT TGCCGCCGAA ACCACCGGAA CTCGGCAATT TACCTTCCGC
GGCGGCGTTT GCGATCCCTT TGCACCGTTT GAGCGGCTTA GCGTTGCGGA CGCTTTCGAG
CGCCATGCGG GCATCGATCT TCTGGGCAGC GTGTTTGCCG GTGGCGAAAC CGACCGCGAC
CATCTGGCCG CACAGCTACG GCAGGTGGGC ATGCGCGTCG CCGGAGATGA TGGCTGGGCC
GATCTATTCA GCCGGGTGAT CGTTGAAAAA GTCGAACCGC ATCTGGGCTT TGACCGACCC
ACCATTCTCG ATCGCTATCC CGTGGCGGAA GCCGCCCTTG CCCGGCCTGC GACCGACGAT
TCGCGCGTCG CCGAACGGTT TGAACTTTAT GCCTGCGGTG TCGAGCTGGC CAATGCCTTT
GGCGAACTGA CCGATCCGCA GGAGCAACGC CGTCGCTTCA TGCTGGAAAT GGCGGAAAAG
CAGCGGGTCT ATGGCGAGAC CTATCCGCTG GACGAGGATT TTCTGGAGGC GCTGGCCATC
ATGCCCGAAG CCTCTGGCAT TGCGCTCGGT TTCGACCGGC TGGTGCTGCT GGCGACCGGT
GCACAGCGAA TCGATCAAGT GTTGTGGACG CCGGTGGCGG AGCCACAGCC GTGA
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| Protein sequence | MTGMSEKRPS ASPWWTPRVH ADRRPFLLGR NAIQAALRLY FSRNDFLEVD AATLQVSPGN
EAHLHAFATS AIGNDGQSHP LYLHTSPEFA CKKLLAAGES RIACFAHVYR NRERGPLHHP
EFTMLEWYRA GETYERLMAD CAAILALAAE TTGTRQFTFR GGVCDPFAPF ERLSVADAFE
RHAGIDLLGS VFAGGETDRD HLAAQLRQVG MRVAGDDGWA DLFSRVIVEK VEPHLGFDRP
TILDRYPVAE AALARPATDD SRVAERFELY ACGVELANAF GELTDPQEQR RRFMLEMAEK
QRVYGETYPL DEDFLEALAI MPEASGIALG FDRLVLLATG AQRIDQVLWT PVAEPQP
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