| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6019 |
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| Symbol | |
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| ID | 7380846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1025906 |
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| End bp | 1028368 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649521 |
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| Product | mannosidase |
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| Protein accession | YP_002547752 |
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| Protein GI | 222106961 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCT ATCTCGATGC CGACATCCGC CCGCTGGAAG CCGGTTGGAC CTTGCTGGTC
TGCGAGCCAG GCACCTATGA CAGCCCGAAA GCATTGCACC GCCCCAGCGC CCGCCTTCAG
GCGCCCGTTC CAGACACCGT CGCCCAGGCG CTGACCAAGG CGGGCCTGTT CGACCCGGAT
CATCCAAGCC CGCTGCATGG CAAGGACATA TGGTATCTCC GCCCCCTGAC CGGCGAACAA
CCGGGCCCGG CCGTGCTGCG CTTCGAAGGC TTGGCGACCA TTGCCGAGGT ATATTTGAAC
GACAGGCTGA TCCTGTCATC GGATAGCATG TTCGAGGCCC ATGATGTCGA TGTGATCCTG
ACCGGCTCGG ACGACGTGTC GATCTGCTTT CGCGCCCTAA GGCCTCATCT GGAAAGACGC
GGGCCAAGAG CCCGCTGGCG CCCGCAGATG ATGAGCGACC AGGGCCTGCG GCTGGTGCGC
ACAACCGCCC TTGGCCATAT GCCCGGCTGG TGCCCTGATA TTCATGCGGT CGGGCCGTAT
CGGCCAATCA GCCTGATCCG CCCGGGCGCA AGCACTATAA CCGACCTCGC GCTGCACTCC
GATCTTGATG AAGACGGCAC CGGCCTGCTT GACTTTGCGT TCCAATTGAT AGGCGCGGTA
TCAACCATGT CCGTGACATG CGCAGGCGAG ACGCTCGCCC TCAAAGCCGA TGCCGACGGC
CATGTTGCGG GCCAGCTTCG TCTTCCCACC GTCGCTCCCT GGTGGCCGCG CACCCATGGC
GAGCCGGTGC TGCACGACAT TCGCCTGACG CTGGATGGAA AGACGCATTC GCTTGGTCTC
ACCGGCTTTC GCCGCGTCCG GATCGACCGG GGCGCGGATG GCAAGGATTT CGCGATCTTC
GTCAATGGCG TGAAAATCTT CTGCCGAGGT GCCGTCTGGA CCAATGCCGA CATAACCCGC
CTGCCCGGCA CCGCCGAGGA TTATGCGTCC TGGCTGAGCA TGGCCGCGGA TGCCGGCATG
AACATGATCC GCATCGGCGG CACCATGACC TATGAAAGCG CCGATTTCTT CAGGCTCTGC
GACCGGCTGG GGCTCATGGT CTGGCAGGAT ATCATGCTGG CCAATTTCGA TTATCCCGCT
GCCGACGAGG CATTTTCCGA CCATATCCGC CGGGAAGTGG AGCAACTTTT AAGCACTGTA
CAGGCGTCTC CCTCACTGGC AATCCTGTGC GGCGGCAGCG AAGTTTATCA GCAGGGCGCC
ATGCTGGGCC TGCCGGAGAC CAACTGGAAA GGCCCTGTCT TCACCAGCCT TCTGCCCCAG
CTCTGCGCGC GCTTTGCACC GCATCTGCCC TATGTGGAAA ACTCGCCGAT GGGTGGCGCA
ATGCCCTTCA GCCCGGATAC CGGCATCACC CATTATTACG GCGTTGGTGC CTATTGCCGC
CCGCTTGAGG ATGCCCGCCG CGCCCATGTC CGCTTTGCCG CCGAATGCCT GGCCTTTGCC
CATGTCCCCC AGCAACAGAC GCTGGACAGG CATTTGTCCG TGTCAGCGGT TCATGATCCC
CGCTGGAAGG CGCGTGTGCC GCGAGACCGG GGTGCCTCCT GGGATTTCGA GGATATTCGT
GACCATTATC TCGCCCTGCT CTACGATGTC GATCCGGCCA GGCCGCGCCG GGAAAATCCG
GCGCGTTACC TGCATCTGTC GCGAGCGGTC AGCGGAGAGG TGTTGGAGGA AACCTATGCG
GAATGGCGAC GTCCCGGCTC ATCCTGCAAT GGCGCGCTGA TCTGGACTTT TCAGGACCTG
ACCATCGGTC CCGGCTGGGG ACTGGTGGAT GCGACCGGTA CGCCGAAACC CGTCTGGTAC
GCAGCGCGGC GCGCCTTCAA CCCCGTCCGC ATCACCATGA CCGACGAAGG CACCAATGGG
CTTGATGTGC ATCTTTGCAA TGACACGGTG CGGGAACAGA CTCTGACCCT GGATCTCACC
TGCCTGCGCG ACGGTAAACA GCCGGTCGTG GCAGCAAGGC GCGCGGTCAC CTTGACGCCA
CGCAGCAGCA TAACACTGCA TGCCACCGAT CTGTTCGGAG CGTTTTTCGA CACGACCTAT
GCCTTCCGCT TCGGGCCGCC CGCCCATGAC GTCACGGTGG CGACCCTGAG CGAGCCTGCA
AGCGGCGAAA TCGTCAGCCA GTCCTTTCAC TTCCCACAGG GACGCGCCCA GGCCATGCAT
GACGCAGAGA TCCGTGCCAC ATTATCTCAG GAAAAAGATG GCTGGTGGCT GATGCTGGAA
ACGGACCGGC TGGCCCAATC CGTCCATATC GCCCTGGAAA ACGGCCGCAG CACTGACGAT
TTCTTTCATC TGGCGCCAGG TTTTGCCCGA CGGGTCAGAC TTCTAACATC GGACAAACCC
AACCAGGACA AACCCAGTGG CGAAATCCTC AGCGGCTCGG CCTCACGACG CTTCCGGTTC
TGA
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| Protein sequence | MITYLDADIR PLEAGWTLLV CEPGTYDSPK ALHRPSARLQ APVPDTVAQA LTKAGLFDPD
HPSPLHGKDI WYLRPLTGEQ PGPAVLRFEG LATIAEVYLN DRLILSSDSM FEAHDVDVIL
TGSDDVSICF RALRPHLERR GPRARWRPQM MSDQGLRLVR TTALGHMPGW CPDIHAVGPY
RPISLIRPGA STITDLALHS DLDEDGTGLL DFAFQLIGAV STMSVTCAGE TLALKADADG
HVAGQLRLPT VAPWWPRTHG EPVLHDIRLT LDGKTHSLGL TGFRRVRIDR GADGKDFAIF
VNGVKIFCRG AVWTNADITR LPGTAEDYAS WLSMAADAGM NMIRIGGTMT YESADFFRLC
DRLGLMVWQD IMLANFDYPA ADEAFSDHIR REVEQLLSTV QASPSLAILC GGSEVYQQGA
MLGLPETNWK GPVFTSLLPQ LCARFAPHLP YVENSPMGGA MPFSPDTGIT HYYGVGAYCR
PLEDARRAHV RFAAECLAFA HVPQQQTLDR HLSVSAVHDP RWKARVPRDR GASWDFEDIR
DHYLALLYDV DPARPRRENP ARYLHLSRAV SGEVLEETYA EWRRPGSSCN GALIWTFQDL
TIGPGWGLVD ATGTPKPVWY AARRAFNPVR ITMTDEGTNG LDVHLCNDTV REQTLTLDLT
CLRDGKQPVV AARRAVTLTP RSSITLHATD LFGAFFDTTY AFRFGPPAHD VTVATLSEPA
SGEIVSQSFH FPQGRAQAMH DAEIRATLSQ EKDGWWLMLE TDRLAQSVHI ALENGRSTDD
FFHLAPGFAR RVRLLTSDKP NQDKPSGEIL SGSASRRFRF
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