Gene Avi_6012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6012 
Symbol 
ID7380839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1015119 
End bp1016210 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content58% 
IMG OID643649514 
Productendoglucanase precursor 
Protein accessionYP_002547745 
Protein GI222106954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2730] Endoglucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA TGACGACAGA CAGATGTGAG AGCGTGTTGA AAAGGACCAT AACCATGTCT 
GTGGCTCTCA CGCTTTCGGT GGCACCGGTC ATCAGCGGAC AAGCGTGGGC CGGTCAGGCC
TGCATGCGAG GGGTCAATCT TTCTGGCGCG GAATTCGGTG AGATTGGCGG CGCCCCGGAC
AGGGCCTATA CCTATCCCAG TGCCAAGACC ATTGGCTATT TTGCCGAGAA AGGCTTCAAT
TCTGTAAGGC TTCCCTTCAA GTGGGAACGC CTGCAACCCA AACTCAACAG TGCTTTCGAC
GCTGACGAGC TGAAACGACT GGATACAGCC GTTGCACAGC TGAAGGAGGC GCATCTGCGG
GTGGTGCTCG ATCCGCATAA TTTCGCGGTC TATCATCAAA AACAGATTAA TGGCCCGGAC
GTGCCAGTGG AGGCCTTCGC GGATTTGTGG ATGCGGCTGG CCGCTCACTA TGCCAATGAC
CAGACCATCG TCTTCGGCTT GATGAATGAG CCGTATGACA TGCCAGCCAG CCAATGGCTC
CCGGCTGCGA ATGCCGCCAT TGCCGCCATT CGTCAAGTTG GCGCGAAAAA CCTTATTCTC
GTGCCGGGCG TGTCCTGGAC AGGTGCCCAT AGCTGGCAAA GCGATGGCTA TGGGGGCGCC
AATGGCGAGG TGATGCTGGG GGTGAAGGAC CCCGGCAATA ATTATGCCTA TGAGGTTCAC
CAGTATTTCG ACGCGGATTT TTCCGGCACC AAGGATGAAT GCAGCCGGGC AGGCGACGCG
GTGGCCGCCA TAGAGACCTT CACGGATTGG CTGCGCAAGA ATGACAAGCG TGGCTATCTC
GGCGAATTCG GTGCGCCGGG CGGAGAATCA TGCGTCAAGG GCATCAAGGA CATGGTTGAA
GTGGTCGAGA AGAACCCGGA TCGCTGGGTC GGTTGGGCCT ATTGGGTGGC CGGTGACTGG
TGGCCGGAAA CCGAAATGCT CAACATCCAG CCCGGCAAGT CCGGTGACAG GCCGCAACTG
GCTGGTCTGA CCCCTTATTT GCGCGATTTC TCGGCGGCCT CGGCGGATTG CCCATCCTTG
CGGTCCCGGT AG
 
Protein sequence
MAVMTTDRCE SVLKRTITMS VALTLSVAPV ISGQAWAGQA CMRGVNLSGA EFGEIGGAPD 
RAYTYPSAKT IGYFAEKGFN SVRLPFKWER LQPKLNSAFD ADELKRLDTA VAQLKEAHLR
VVLDPHNFAV YHQKQINGPD VPVEAFADLW MRLAAHYAND QTIVFGLMNE PYDMPASQWL
PAANAAIAAI RQVGAKNLIL VPGVSWTGAH SWQSDGYGGA NGEVMLGVKD PGNNYAYEVH
QYFDADFSGT KDECSRAGDA VAAIETFTDW LRKNDKRGYL GEFGAPGGES CVKGIKDMVE
VVEKNPDRWV GWAYWVAGDW WPETEMLNIQ PGKSGDRPQL AGLTPYLRDF SAASADCPSL
RSR