Gene Avi_6011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6011 
SymbolpurU 
ID7380838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1013874 
End bp1014758 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content57% 
IMG OID643649513 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_002547744 
Protein GI222106953 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGTT ATGTTCTGAC GGTATCGTGT CCATCCAAGC GCGGCATTGT CGCGGCCCTT 
TCCGGGTATC TGGCGGAAAT GGGATGCAAT ATCGTCGACA GCTCGCAATT CGACGATCTC
GATACCGACC GTTTTTTCAT GCGCGTCAGC TTTATTTCCG AACAGGGGGC AAGCCGCGAA
AAGATCGAGG CAGGCCTTGC ACCCATTGTC GATAATTTCC AGATGGAGAT CGGGCTTTAC
GATTCGACAG AGCGGGTCAA GGTTCTGCTG ATGGTGTCAC GCTTCGGCCA TTGCCTGAAC
GACCTGCTGT ATCGCTGGAA AATCGGCGCC CTGCCGATCG ATATCGTCGG CGTGGTCTCC
AACCATTTCG ACTACCAGAA GGTCGTGGTC AATCATGACA TTCCCTTCCA TCACATCAAG
GTGACGAAGG ACAACAAGCC GCAGGCCGAA GCCCAGCTGA TGGAGCTTGT GCAGCAGACC
GGCACCGAAC TGATCGTGCT GGCCCGTTAT ATGCAGGTCC TCTCCGATGC GATGTGCCAG
AAGATGTCGG GCAAGATCAT CAACATCCAC CATTCCTTCC TGCCGAGCTT CAAGGGTGCC
AATCCCTACA AGCAGGCCTT CGAGCGCGGC GTGAAGCTGA TCGGGGCAAC CGCCCATTAT
GTCACCGCCG ATCTCGACGA AGGCCCGATC ATCGAGCAGG ATGTCGCGCG CGTCACCCAT
GCCCAGAACG CCGAGGATTA CGTGTCGATC GGCCGCGATG TGGAAAGCCA GGTTCTCGCC
CGCGCCATCC ATGCCCATAT CCATCATCGC ACCTTCATCA ACGGCAACAA GAGCGTGGTT
TTTCCGGCCA GCCCCGGCTC CTATGCATCG GAACGCATGG GATAG
 
Protein sequence
MTSYVLTVSC PSKRGIVAAL SGYLAEMGCN IVDSSQFDDL DTDRFFMRVS FISEQGASRE 
KIEAGLAPIV DNFQMEIGLY DSTERVKVLL MVSRFGHCLN DLLYRWKIGA LPIDIVGVVS
NHFDYQKVVV NHDIPFHHIK VTKDNKPQAE AQLMELVQQT GTELIVLARY MQVLSDAMCQ
KMSGKIINIH HSFLPSFKGA NPYKQAFERG VKLIGATAHY VTADLDEGPI IEQDVARVTH
AQNAEDYVSI GRDVESQVLA RAIHAHIHHR TFINGNKSVV FPASPGSYAS ERMG