Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6011 |
Symbol | purU |
ID | 7380838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1013874 |
End bp | 1014758 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649513 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_002547744 |
Protein GI | 222106953 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGTT ATGTTCTGAC GGTATCGTGT CCATCCAAGC GCGGCATTGT CGCGGCCCTT TCCGGGTATC TGGCGGAAAT GGGATGCAAT ATCGTCGACA GCTCGCAATT CGACGATCTC GATACCGACC GTTTTTTCAT GCGCGTCAGC TTTATTTCCG AACAGGGGGC AAGCCGCGAA AAGATCGAGG CAGGCCTTGC ACCCATTGTC GATAATTTCC AGATGGAGAT CGGGCTTTAC GATTCGACAG AGCGGGTCAA GGTTCTGCTG ATGGTGTCAC GCTTCGGCCA TTGCCTGAAC GACCTGCTGT ATCGCTGGAA AATCGGCGCC CTGCCGATCG ATATCGTCGG CGTGGTCTCC AACCATTTCG ACTACCAGAA GGTCGTGGTC AATCATGACA TTCCCTTCCA TCACATCAAG GTGACGAAGG ACAACAAGCC GCAGGCCGAA GCCCAGCTGA TGGAGCTTGT GCAGCAGACC GGCACCGAAC TGATCGTGCT GGCCCGTTAT ATGCAGGTCC TCTCCGATGC GATGTGCCAG AAGATGTCGG GCAAGATCAT CAACATCCAC CATTCCTTCC TGCCGAGCTT CAAGGGTGCC AATCCCTACA AGCAGGCCTT CGAGCGCGGC GTGAAGCTGA TCGGGGCAAC CGCCCATTAT GTCACCGCCG ATCTCGACGA AGGCCCGATC ATCGAGCAGG ATGTCGCGCG CGTCACCCAT GCCCAGAACG CCGAGGATTA CGTGTCGATC GGCCGCGATG TGGAAAGCCA GGTTCTCGCC CGCGCCATCC ATGCCCATAT CCATCATCGC ACCTTCATCA ACGGCAACAA GAGCGTGGTT TTTCCGGCCA GCCCCGGCTC CTATGCATCG GAACGCATGG GATAG
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Protein sequence | MTSYVLTVSC PSKRGIVAAL SGYLAEMGCN IVDSSQFDDL DTDRFFMRVS FISEQGASRE KIEAGLAPIV DNFQMEIGLY DSTERVKVLL MVSRFGHCLN DLLYRWKIGA LPIDIVGVVS NHFDYQKVVV NHDIPFHHIK VTKDNKPQAE AQLMELVQQT GTELIVLARY MQVLSDAMCQ KMSGKIINIH HSFLPSFKGA NPYKQAFERG VKLIGATAHY VTADLDEGPI IEQDVARVTH AQNAEDYVSI GRDVESQVLA RAIHAHIHHR TFINGNKSVV FPASPGSYAS ERMG
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