Gene Avi_6003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6003 
Symbol 
ID7380831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1006318 
End bp1006752 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content60% 
IMG OID643649506 
Producthypothetical protein 
Protein accessionYP_002547737 
Protein GI222106946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGTT TGCTCACACG TCTGACACTG GTGGCCGCAG AAGGCGTGAA GCCAAGAATC 
GACAAGGCTC GGCGCAACGC CATCGCTGGC GCTATTGCCG GGTTTTGCTT TCTGATTGCC
ATCGTCGCAG CCATCGTGTC CGGCTGGATC TTCCTGGCAG CTGAAATCGG TGCAGGTCCG
GCCGGGCTGG TGATTGCAGG TATTGCGGTG TTGATCGGTC TGATCACGCT AGCGGTCGTC
TCCATCATCA ATCGCCGTGA GGCGCGCAGG CGAGCATTTC TTCAAACCGC GACGCTGGCA
GCGACCGATC CATTGACCAT GGGCCTGATG GGACGCTTGC CCGGAATGCT GAAGGTCAAC
CCCATCGTCG GGGTCGCGGC GGTCGGCATG CTGGCCTATC TGTTTGCGCG CAGCCAAGGG
ATCGGCCGTA AGTAA
 
Protein sequence
MFGLLTRLTL VAAEGVKPRI DKARRNAIAG AIAGFCFLIA IVAAIVSGWI FLAAEIGAGP 
AGLVIAGIAV LIGLITLAVV SIINRREARR RAFLQTATLA ATDPLTMGLM GRLPGMLKVN
PIVGVAAVGM LAYLFARSQG IGRK