| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5982 |
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| Symbol | tonB |
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| ID | 7380817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 994731 |
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| End bp | 995684 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649492 |
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| Product | tonB protein |
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| Protein accession | YP_002547723 |
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| Protein GI | 222106932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGC AAGCGGACCC GACGGGGCGG CGCAGTTCCG CCCTCGATTG GCTGCTCTGG
TGTACAGCCG GAACCCTGGT GTTTGCCGCC CATGCCGGTG CCGTGGCGCT GATGCTGCAA
CAGCCGGAAG AACCGTTGGC CGACGGTGCT CCGCCTGCTG CCATCATGAT CGAACTGGCT
CCCGAGCCGG TCGCTACCAA GGTCGAAGAA AACCAGATCA CGCCCGATCA GCAGGATGCC
GAAGAGGTAA AATCCGAGGC GGTTGAGAAG CCACCACAGC CGGTCGAACC GCCACCCGTT
CCACAGCCGC CCGAGGTGCA GCCCCCGGAA CCGACACCAC CTGAAAAAGT TGAGGAAACG
CCACCTCCGC CACCCGAAGT CGCGGAAGTA CAGCCCGAAC CACCACCGGA ACCCGAGCCA
AAACCGGTGG AAGAACCGAC GGTCGAGGAA CAGGTAACCA AGGAACTGGA AAATGTGGAA
GTGCCGCTGC CCGTAACTCG CCCTGTGCAA AAGCCGGTGG AGACCGCAGA CACGACGCCG
GTTAAAAAGA AGCAACCGAA AGCCACCCCG CAGCCGCAGG CCCAGAAAGC CCAGCGCGAG
GCCCAGGCAG AGGTGACGCA ATCGGACAGG ACGGCAGCCT CCACCACCAG TTCTGGTCTG
TTTTCATCGA GCGTCAGCCC GCAAAAATGG CAGGCACGGT TGGCGGCCTA TCTTGAGCGA
CGCAAGCGCT ATCCAAGCGA AGCCCGCGCC AACAAGGAGG AAGGCACGGC CTATGCCCGC
TTCCAGATCG ATGACAGCGG CAATGTTCTC TCGGTGTCGA TTTCCCGGTC TTCAGGGTTT
CCAAATCTGG ATCAGGCAAC GGTCGATGCC ATAAAACGTT CGTCGCCGGT GCCAGCACCT
CCGCCAGGTG TCAGCAAGAC GATTACGGTG CCGTTCCGCT TCAATCTCAA ATAA
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| Protein sequence | MSRQADPTGR RSSALDWLLW CTAGTLVFAA HAGAVALMLQ QPEEPLADGA PPAAIMIELA
PEPVATKVEE NQITPDQQDA EEVKSEAVEK PPQPVEPPPV PQPPEVQPPE PTPPEKVEET
PPPPPEVAEV QPEPPPEPEP KPVEEPTVEE QVTKELENVE VPLPVTRPVQ KPVETADTTP
VKKKQPKATP QPQAQKAQRE AQAEVTQSDR TAASTTSSGL FSSSVSPQKW QARLAAYLER
RKRYPSEARA NKEEGTAYAR FQIDDSGNVL SVSISRSSGF PNLDQATVDA IKRSSPVPAP
PPGVSKTITV PFRFNLK
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