| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5977 |
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| Symbol | rocF |
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| ID | 7381060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 991228 |
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| End bp | 992160 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649488 |
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| Product | arginase |
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| Protein accession | YP_002547719 |
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| Protein GI | 222106928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01229] arginase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTGCA GATTGATCGG AGTTCCCTTG CAGATCGGGG CGGGCCGTCT GGGCTGTGAA
ATGGGACCGA GCGCGCTGCG TATTGCCGGG CTCGGCCCGA TGCTGGAAGA GCTCGGCCAT
CGCGTCACCG ATCTCGGCAA TGTCGCGCCT GCCGCCTTCA AGTCCCTTAG TCATCCCAAT
CCGGCTGTGC ATCACCTGCC GGAAACCGTT GCCTGGATCG AGACCTTGTC CGAGGCCGCT
TACCGCGAAA GTGCGGATGC CATGCCGATT TTTCTGGGTG GTGACCACGC GCTTTCGGCT
GGCACGGTAC CGGGGCTGGC GCGCCGGGCG GCGGAACAAG GCCGACCGCT TTTTGTGCTC
TGGCTGGATG CCCATACCGA TTTCCATACG CTGGAAACCA CGGAAAGCGG CAATCTGCAT
GGTACGCCGG TGGCTTATTT CACCGGTCAA CCGGGTTTTA CCGGCTATTT TCCGGATCTG
GTGGAAGCGG TCGATCCGGC TCATGTGGCA ATGATCGGCA TTCGCAGTGT CGATCCGGCG
GAACGCGCCG CTTTGCGCCG GACCGGCATC ACCGTGCATG ACATGCGGAT GATCGATGAG
CATGGCGTTG CCGTGCTGCT GCGGGCTTTT CTGGATAAGG TTCGGGCCGC GAATGGCTTG
CTGCATATCA GTTTCGATGT GGATTTTCTC GATCCGATGA TTGCGCCCGC CGTTGGCACC
ACAGTGCCGG GTGGTGCGAC CTTCCGCGAG GCGCATCTGG TGATGGAAAT GCTGCATGAC
AGCGGCCTGG TCTCCAGCCT TGATCTGGTC GAACTCAACC CTTTCCTGGA CGAGCGGGGC
CGCACCGCAA TCCTGATGGC GGATCTGACC GCCAGCCTGA TGGGACGGCA GGTCATGGAC
CGTCCGACAC GCGATTATGC CGGGAGCGTT TGA
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| Protein sequence | MECRLIGVPL QIGAGRLGCE MGPSALRIAG LGPMLEELGH RVTDLGNVAP AAFKSLSHPN
PAVHHLPETV AWIETLSEAA YRESADAMPI FLGGDHALSA GTVPGLARRA AEQGRPLFVL
WLDAHTDFHT LETTESGNLH GTPVAYFTGQ PGFTGYFPDL VEAVDPAHVA MIGIRSVDPA
ERAALRRTGI TVHDMRMIDE HGVAVLLRAF LDKVRAANGL LHISFDVDFL DPMIAPAVGT
TVPGGATFRE AHLVMEMLHD SGLVSSLDLV ELNPFLDERG RTAILMADLT ASLMGRQVMD
RPTRDYAGSV
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