| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5970 |
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| Symbol | frcC |
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| ID | 7381054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 985418 |
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| End bp | 986500 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649482 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547713 |
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| Protein GI | 222106922 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0370627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC CAAAAGCCGC CACCAAACCT CATCTTGAAT ACGAGAATGT GCTGTCGGGC
AGTGCCACTG CGGTCGCGCA GTTCGATACC AACGACAAGA CGCCATTGCA AAAGTTTCAG
CACTTCCTGC ATTCCAGCCC GGCTGCCGTG CCGCTGATCG TGCTGATTCT GTCACTGATC
GCGTTCGGCG TCATTCTGGG TGGCAAATTC TTTTCACCCT TTGCCCTGAC GCTGATTTTG
CAGCAGGTTG CCATTACCGG CATCATCGGC GCAGCCCAGA CCCTGATTAT CCTCACCGCC
GGGATTGACC TTTCGGTGGG GGCCATCATG GTCCTGTCTT CTGTCGTCAT GGGGCAATTT
GCCGTTCACT ATGGCGTGCC TGGCCCGCTT GCCGTGCTGT GCGGCTTTGC CGTCGGCGGC
ATTTGCGGCT TCATCAATGG CGTGCTGGTG GCCCGCGTCA AGCTGCCCCC CTTCATTGTC
ACACTCGGCA TGTGGCAGAT CGTGCTGGCA GCCAATTTCC TGTATTCCGG CAACGAGACA
ATCCGCTCGC AAGACCTGGG CACCAATGCG CCCATCCTGC AATATTTTGG CCAAAGCTTT
AAGTTGGGCG GTGCCGTCCT GACCTATGGT GTGATCTCAC TCGCCCTTCT GGTTGCGGTC
CTCTGGTATG TCTTGAACAA CACCGCCTGG GGCCGCCATC TCTACGCTGT CGGCGACGAT
CCCGATGCAG CGGAATTGTC TGGCGTCAAT GTCAAGCGCA TGCTGATTTC CGTCTATACG
CTTGCTGGCC TGATCTGTGC GCTGGGTGGT TGGGCGATGA TTGGCCGTAT CGGCTCGGTA
TCGCCAACGG CTGGGCAGTT TGCCAATATC GAATCCATCA CGGCCGTGGT GATTGGCGGC
ATGTCACTGT TTGGTGGCCG TGGTTCCATC ATGGGCATGC TGTTTGGCGC GTTGATCGTC
GGCGTGTTCC AGCTTGGCCT GCGCATGGCC GGCACCGACC CGCAATGGAC CTATATGCTG
ATTGGCGTGC TGATCATTGC CGCCGTCGCA ATTGACCAAT GGATCAGAAA GGTAGCTGGC
TAA
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| Protein sequence | MSEPKAATKP HLEYENVLSG SATAVAQFDT NDKTPLQKFQ HFLHSSPAAV PLIVLILSLI
AFGVILGGKF FSPFALTLIL QQVAITGIIG AAQTLIILTA GIDLSVGAIM VLSSVVMGQF
AVHYGVPGPL AVLCGFAVGG ICGFINGVLV ARVKLPPFIV TLGMWQIVLA ANFLYSGNET
IRSQDLGTNA PILQYFGQSF KLGGAVLTYG VISLALLVAV LWYVLNNTAW GRHLYAVGDD
PDAAELSGVN VKRMLISVYT LAGLICALGG WAMIGRIGSV SPTAGQFANI ESITAVVIGG
MSLFGGRGSI MGMLFGALIV GVFQLGLRMA GTDPQWTYML IGVLIIAAVA IDQWIRKVAG
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