Gene Avi_5968 details

Gene Information

• Locus tag: Avi_5968
• Symbol: frcK
• ID: 7381052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: -
• Start bp: 984004
• End bp: 984639
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643649480
• Product: putative fructose transport system kinase
• Protein accession: YP_002547711
• Protein GI: 222106920
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1072] Panthothenate kinase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.682486
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAT CTATTTCCTC CCTTCTTGAG GAAATCACGC GGCTGGCCCA AGGGGCCAGC 
CGTTTCATGA TCGCCATTGC CGGACCGCCA GGGGCCGGTA AGTCCACCCT GTCGGAAGCC 
TTGCGCGAGG CGCTGATTGC GCGCGGCGAA ACTGCGGAAA TCCTGCCGAT GGACGGATTT 
CACATGGACA ACGGCATTCT GGAACAGCGC GGCCTGCTGA AGCGCAAAGG CGCACCGGAA 
ACCTTCGACG TGCGCGGCTT TCTCGACATC GTCACGGCGG TGAAGGCTGG CGACGAGGAA 
GTGCTTGTGC CGGTTTTCGA CCGCGACCGC GAATTGGCGA TTGCCTCGGC CCGGCCAATT 
GCACCGGAAA CCCGCTTCAT TCTGGTCGAA GGCAATTACC TGCTTCTGGA TCGCGCGCCT 
TGGACCCGTC TGCAAAGCTG TTTCGACCTG ACTGTGTTCG TTGGCCCCCC ACTGGAGGTG 
CTGGAACAGC GCCTGCGGGA CCGTTGGGTT CATTACGGAC TGGACGAGGC CGCAATCGCC 
TGGAAATTGA ACGGCAACGA CTTGCCCAAC GGGCGATTGG TGATCGAAGC CTCCCGGCCC 
GCTGATATCA GTGTTGATAT CGTCGCCATC GCGTGA 

 

Protein sequence

MTTSISSLLE EITRLAQGAS RFMIAIAGPP GAGKSTLSEA LREALIARGE TAEILPMDGF 
HMDNGILEQR GLLKRKGAPE TFDVRGFLDI VTAVKAGDEE VLVPVFDRDR ELAIASARPI 
APETRFILVE GNYLLLDRAP WTRLQSCFDL TVFVGPPLEV LEQRLRDRWV HYGLDEAAIA 
WKLNGNDLPN GRLVIEASRP ADISVDIVAI A