Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5958 |
Symbol | hutH |
ID | 7381043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 973998 |
End bp | 975536 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649471 |
Product | histidine ammonia-lyase |
Protein accession | YP_002547702 |
Protein GI | 222106911 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.436548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTA CCCTTCACCC CGGCTCTGTG CCGCTGGCCG ATCTGGCGAA AATCTATTGG CATGGTGAGC CTGCCGTTCT GGATCGCAGT TTTGATGCGG GCATTGAGCG CGCCGCCGCC CGTATTGCCG CCATTGCTGC GGGCAATGAG CCAGTGTACG GCGTCAACAC CGGCTTTGGC AAACTGGCCT CCATCAAGAT TGATGCAGCC GATACGGCCA CGCTTCAGCG CAATCTCATT CTCTCCCATT GCTGCGGCGT CGGTGCGCCG CTGGCTGAGA ATATTGTGCG GCTGATTTTG TCGCTCAAGC TGATTTCGCT GGGCCGTGGA GCCTCCGGCG TGCGGCTGGA CCTGGTGCGG TTGATTGAGG CCATGCTGGA AAAAGGCGTG ATTCCGCTGA TCCCGGAAAA GGGCTCTGTC GGCGCATCTG GCGATTTGGC CCCGCTGGCG CATATGGCGG CGGTGATGAT GGGCGAGGCA GAAGCCTTTT ATCAGGGCGA AAAACTGCCG GGCAGGATTG CGCTGGAACG CGCTGGCCTC ACCCCGGTTA TTTTGGCCGC CAAAGAAGGT TTGGCGCTGA TCAATGGCAC GCAGGCCTCC ACCGCTTTGG CTTTGGCAGG CCTTTTCCGC GCCCATCGCG CCGCCCAAGC CGCATTGATA ACCGGGGCGA TGTCTACCGA TGCGGCAATG GGTTCCTCGG CACCATTTAC CGCCGATATT CACACGCTGC GCGGCCACAA GGGCCAGATC GATACGGCTG CCAGCTTGCG GGCTTTGCTG GAAGGCTCGG TGATCCGCCA AAGCCATCTG GATGGTGACG AGCGCGTGCA AGACCCCTAT TGCATCCGCT GCCAGCCGCA GGTGGATGGA GCCTGCCTTG ATCTGCTGCG GATGACCGCC CGCACCTTGG AAATCGAGGC CAATGCGGTG ACGGATAATC CGTTGGTGCT GTCCGATGAC AGTGTGGTGT CTGGCGGCAA TTTTCACGCC GAGCCAGTGG CCTTTGCGGC CGATCAGATT GCCATTGCCG TGTGTGAAAT TGGGGCCATT GCCCAGCGGC GCATTGCGCT TTTGGTGGAC CCGACCCTGT CCTATGGCTT GCCAGCGTTT TTGGCGAAAA AACCGGGCCT CAATTCCGGC CTGATGATTG CCGAAGTCAC CTCTGCCGCG CTGATGAGCG AAAACAAGCA GATGGCCCAT CCGGCCTCCG TCGATTCAAC GCCAACGTCT GCCAATCAGG AAGACCATGT GTCCATGGCC TGCCACGGTG CGCGGCGGCT GTTGCAAATG ACTGAAAACC TGTTTGCCAT CATTGGCATT GAGGCTCTCA CCGCAGCTCA AGGCGTGGAG TTTCGCGCAC CCCTCACCAC CAGCCCGGAG CTGCAAAAGG CCATGGAGAC CTTGCGCGCC GTTGTGCCGA CGCTGGAAGA AGATCGGTTT ATGGCCCCGG ACTTGGCGGC AGCCAGCGCT CTGGTGGCCG ATGGGTCTTT GGTGGGCAGT GTATCCTCTG GGATTTTGCC GGGGTTGGAG GGGTTTTAA
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Protein sequence | MTITLHPGSV PLADLAKIYW HGEPAVLDRS FDAGIERAAA RIAAIAAGNE PVYGVNTGFG KLASIKIDAA DTATLQRNLI LSHCCGVGAP LAENIVRLIL SLKLISLGRG ASGVRLDLVR LIEAMLEKGV IPLIPEKGSV GASGDLAPLA HMAAVMMGEA EAFYQGEKLP GRIALERAGL TPVILAAKEG LALINGTQAS TALALAGLFR AHRAAQAALI TGAMSTDAAM GSSAPFTADI HTLRGHKGQI DTAASLRALL EGSVIRQSHL DGDERVQDPY CIRCQPQVDG ACLDLLRMTA RTLEIEANAV TDNPLVLSDD SVVSGGNFHA EPVAFAADQI AIAVCEIGAI AQRRIALLVD PTLSYGLPAF LAKKPGLNSG LMIAEVTSAA LMSENKQMAH PASVDSTPTS ANQEDHVSMA CHGARRLLQM TENLFAIIGI EALTAAQGVE FRAPLTTSPE LQKAMETLRA VVPTLEEDRF MAPDLAAASA LVADGSLVGS VSSGILPGLE GF
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