Gene Avi_5958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5958 
SymbolhutH 
ID7381043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp973998 
End bp975536 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content60% 
IMG OID643649471 
Producthistidine ammonia-lyase 
Protein accessionYP_002547702 
Protein GI222106911 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.436548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA CCCTTCACCC CGGCTCTGTG CCGCTGGCCG ATCTGGCGAA AATCTATTGG 
CATGGTGAGC CTGCCGTTCT GGATCGCAGT TTTGATGCGG GCATTGAGCG CGCCGCCGCC
CGTATTGCCG CCATTGCTGC GGGCAATGAG CCAGTGTACG GCGTCAACAC CGGCTTTGGC
AAACTGGCCT CCATCAAGAT TGATGCAGCC GATACGGCCA CGCTTCAGCG CAATCTCATT
CTCTCCCATT GCTGCGGCGT CGGTGCGCCG CTGGCTGAGA ATATTGTGCG GCTGATTTTG
TCGCTCAAGC TGATTTCGCT GGGCCGTGGA GCCTCCGGCG TGCGGCTGGA CCTGGTGCGG
TTGATTGAGG CCATGCTGGA AAAAGGCGTG ATTCCGCTGA TCCCGGAAAA GGGCTCTGTC
GGCGCATCTG GCGATTTGGC CCCGCTGGCG CATATGGCGG CGGTGATGAT GGGCGAGGCA
GAAGCCTTTT ATCAGGGCGA AAAACTGCCG GGCAGGATTG CGCTGGAACG CGCTGGCCTC
ACCCCGGTTA TTTTGGCCGC CAAAGAAGGT TTGGCGCTGA TCAATGGCAC GCAGGCCTCC
ACCGCTTTGG CTTTGGCAGG CCTTTTCCGC GCCCATCGCG CCGCCCAAGC CGCATTGATA
ACCGGGGCGA TGTCTACCGA TGCGGCAATG GGTTCCTCGG CACCATTTAC CGCCGATATT
CACACGCTGC GCGGCCACAA GGGCCAGATC GATACGGCTG CCAGCTTGCG GGCTTTGCTG
GAAGGCTCGG TGATCCGCCA AAGCCATCTG GATGGTGACG AGCGCGTGCA AGACCCCTAT
TGCATCCGCT GCCAGCCGCA GGTGGATGGA GCCTGCCTTG ATCTGCTGCG GATGACCGCC
CGCACCTTGG AAATCGAGGC CAATGCGGTG ACGGATAATC CGTTGGTGCT GTCCGATGAC
AGTGTGGTGT CTGGCGGCAA TTTTCACGCC GAGCCAGTGG CCTTTGCGGC CGATCAGATT
GCCATTGCCG TGTGTGAAAT TGGGGCCATT GCCCAGCGGC GCATTGCGCT TTTGGTGGAC
CCGACCCTGT CCTATGGCTT GCCAGCGTTT TTGGCGAAAA AACCGGGCCT CAATTCCGGC
CTGATGATTG CCGAAGTCAC CTCTGCCGCG CTGATGAGCG AAAACAAGCA GATGGCCCAT
CCGGCCTCCG TCGATTCAAC GCCAACGTCT GCCAATCAGG AAGACCATGT GTCCATGGCC
TGCCACGGTG CGCGGCGGCT GTTGCAAATG ACTGAAAACC TGTTTGCCAT CATTGGCATT
GAGGCTCTCA CCGCAGCTCA AGGCGTGGAG TTTCGCGCAC CCCTCACCAC CAGCCCGGAG
CTGCAAAAGG CCATGGAGAC CTTGCGCGCC GTTGTGCCGA CGCTGGAAGA AGATCGGTTT
ATGGCCCCGG ACTTGGCGGC AGCCAGCGCT CTGGTGGCCG ATGGGTCTTT GGTGGGCAGT
GTATCCTCTG GGATTTTGCC GGGGTTGGAG GGGTTTTAA
 
Protein sequence
MTITLHPGSV PLADLAKIYW HGEPAVLDRS FDAGIERAAA RIAAIAAGNE PVYGVNTGFG 
KLASIKIDAA DTATLQRNLI LSHCCGVGAP LAENIVRLIL SLKLISLGRG ASGVRLDLVR
LIEAMLEKGV IPLIPEKGSV GASGDLAPLA HMAAVMMGEA EAFYQGEKLP GRIALERAGL
TPVILAAKEG LALINGTQAS TALALAGLFR AHRAAQAALI TGAMSTDAAM GSSAPFTADI
HTLRGHKGQI DTAASLRALL EGSVIRQSHL DGDERVQDPY CIRCQPQVDG ACLDLLRMTA
RTLEIEANAV TDNPLVLSDD SVVSGGNFHA EPVAFAADQI AIAVCEIGAI AQRRIALLVD
PTLSYGLPAF LAKKPGLNSG LMIAEVTSAA LMSENKQMAH PASVDSTPTS ANQEDHVSMA
CHGARRLLQM TENLFAIIGI EALTAAQGVE FRAPLTTSPE LQKAMETLRA VVPTLEEDRF
MAPDLAAASA LVADGSLVGS VSSGILPGLE GF