Gene Avi_5955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5955 
Symbol 
ID7381040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand- 
Start bp970941 
End bp971513 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID643649468 
Producthypothetical protein 
Protein accessionYP_002547699 
Protein GI222106908 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTC TGCGTCGGGA AGACTATCGC CGCATGCCCT GGAAGAACGG CCAGGGCATG 
ACAGAGGAAA TCCTGATTTT TCCGCCTGAA AGTGGCCTTG GGGATTTCGA TTACCGTCTG 
TCCATCGCCC ATGTCGGCGC GGACGGCCCT TTTTCGACCT TTCCCGGTGT GGACCGCAGC 
ATTGCACTTC TTGAGGGCGG CGGCATGGTT CTGTCGCTAC CGAACAGGCA AGACGTAACT 
CTTGAACAAG GCGGTGCCCC CCTTGCCTTT TCCGGCGATT GGGCCATCGC CAGCCGCAAT 
CTTGACGGCA AAACCATCGA TCTCAATATC ATGTCCCGGC GCGGCCGTTT TCGCCACACC 
ATGCAACGGG ACAATTTGGA AATGCGGCAC GGCCAGATGA CCACAACACT GTTGATTTTC 
AACAGTGACG CCACTGTCAT TGCCAGTGGA CAAACCATCT CACTGCGCCG TTTCGATACC 
CTGGTGTTTT CGCCAGGAGA TCCACTGGAC CTGACACTCA CGGCGCAGTG CGATCTCCTC 
ACCGTGACGC TAGACGCAGG GTATCAAAGC TGA
 
Protein sequence
MQILRREDYR RMPWKNGQGM TEEILIFPPE SGLGDFDYRL SIAHVGADGP FSTFPGVDRS 
IALLEGGGMV LSLPNRQDVT LEQGGAPLAF SGDWAIASRN LDGKTIDLNI MSRRGRFRHT 
MQRDNLEMRH GQMTTTLLIF NSDATVIASG QTISLRRFDT LVFSPGDPLD LTLTAQCDLL 
TVTLDAGYQS