| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5953 |
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| Symbol | vdh |
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| ID | 7381038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 968604 |
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| End bp | 970085 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649466 |
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| Product | vanillin: NAD oxidoreductase |
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| Protein accession | YP_002547697 |
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| Protein GI | 222106906 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.804682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGCGA TCGCTCGGTC GGAATCCTAT GGCGCTTACA GCGGCCAGTA TATTGGCGGC
ATTTGGCGTC CTGGCGCCGC AGGTGACATC CTTAACGTCA ACAATCCCTA TTCCGGGGAG
AGGATTGCTG AAATCGCACT GGCCTCAGTA GAGGATCTTG ATGCGGCCTA TTTGGCTGCC
GAAGCGGCGC AGCGCGATTG GGCAGATAGG CCCGCCAGTG TAAAGAGGGA TGTCTTTCTG
CGTGCGGCGC AGATCGTTGA ACAACGGCAT GCTGAAATCG TCGATATGAT CATCGCCGAA
TCCGGCAGCA CGCGCATAAA GGCCGAGATT GAATGGGCCT CGGTGCGCGA TATGATGCTG
GAAGTGTCCG GCATGCCATC GCGCGTCCAG GGCCGGATTA TCCCCAGCGA AGTGCCGGGA
AAGGATGTGC GGGTGCATCG CGCTCCTCTC GGTGTCATCG GGGTCATCAG CCCTTGGAAC
ATGCCGATGC ATCTGTCGCA TCGGTCGATC GCACCGGCGT TGGCGCTCGG CAATGCGGTG
GTTGTCAAGC CGGCGGAAGA GACCCCGATC AGCGGCGGGT TGATGATTGC CAAGATTTAT
GAAGAGGCTG GCCTGCCGGG CGGCCTCCTG AATGTGGTCG TCGGCCTTGC CGGGGTAATC
GGCGACATGT TCACGCTGCA TCCCGTGCCG AAATTCATTT CCTTCACGGG ATCGGCACGC
GTCGGTCGTC ATATCGGGCA GCTTGCCATG CAGGGCTCAA CCTTGAAACG GGTGGGGCTT
GAACTTGGCG GTAATGCGCC CTGCGTCGTG CTTGATGATG CGGATCTCGA TCTGGCCGTC
CGTGGCGCGC TCTTTGGCCG TTTCCTGCAC CAGGGCCAGA TCTGCATGAG CACCAACCGG
ATCATCGTTG ATGCCTCGAT CTATGACGAG TTTGTCACTC GCTTCATTGA GCGTGCCTCC
AAACTTACCT ATGGTGATCC CAGTCTGATC GGCACCAATA TCGGTCCGAT CATCAGCAAG
CGCCAGCTTG ACGGTATCCT GGCAAAAATT AATGAAGCCA AGGCCTCTGG CCTTCATCTG
GCGTTGGGTG GTGAACCGCA AGGCCAGGTC CTGCCGCCGC ATGTGTTTAT TGATGTCGAT
AACAACTCGA CGCTGGCCCA AAGTGAACTG TTTGGCCCCG TTGTTCCGAT CATCAAGGCT
CATGGTGAGG AGGACGCGCT GAAACTCGCC AACCAGACCG AATTCGGACT TTCCAGTGCG
GTTTTCACAC GCGATGAAGG GCGTGGCCTG CGGTTTGCCA AGCGCATCCA TGCCGGCATG
ACCCATATCA ACGATATTTC CGTTGCCGAT AGCCCCAATG CCATGTTTGG TGGTGAAAAG
AATAGTGGTA TCGGGCGTTT CAACAGCGAT TGGGTCATCG CGGAATTCAC CTGTGATCAC
CTGATCACCA CCCAAAGCAT TCCCCTGCAA TATCCCTTCT GA
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| Protein sequence | MNAIARSESY GAYSGQYIGG IWRPGAAGDI LNVNNPYSGE RIAEIALASV EDLDAAYLAA
EAAQRDWADR PASVKRDVFL RAAQIVEQRH AEIVDMIIAE SGSTRIKAEI EWASVRDMML
EVSGMPSRVQ GRIIPSEVPG KDVRVHRAPL GVIGVISPWN MPMHLSHRSI APALALGNAV
VVKPAEETPI SGGLMIAKIY EEAGLPGGLL NVVVGLAGVI GDMFTLHPVP KFISFTGSAR
VGRHIGQLAM QGSTLKRVGL ELGGNAPCVV LDDADLDLAV RGALFGRFLH QGQICMSTNR
IIVDASIYDE FVTRFIERAS KLTYGDPSLI GTNIGPIISK RQLDGILAKI NEAKASGLHL
ALGGEPQGQV LPPHVFIDVD NNSTLAQSEL FGPVVPIIKA HGEEDALKLA NQTEFGLSSA
VFTRDEGRGL RFAKRIHAGM THINDISVAD SPNAMFGGEK NSGIGRFNSD WVIAEFTCDH
LITTQSIPLQ YPF
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