| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5949 |
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| Symbol | |
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| ID | 7381035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 964089 |
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| End bp | 964841 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649463 |
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| Product | transcriptional regulator TetR family |
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| Protein accession | YP_002547694 |
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| Protein GI | 222106903 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCA GAACCCAGGC CAAGCGCCAG GCCATTGTCG ACATCGCCGG GTCGATGTTT
CTTCGCCATG GCTATGCCCA GGTATCGATG GCGGCGGTGG CGGCAGAAGT CGGCGGATCC
AAGGGAACGC TCTACGGCTA TTTCCCAAGC AAGGCGGATC TCTTTGCAGC TTTTGTCGTC
CAGGCGGGTG AAGATGCCTT TGCCCCTTTG ATGGACGCCA TCGACAAGGA GCAGGACGCG
GCGAATACGC TGAAAGCACT CGGAATGAAC TATCTGAGGC TGCTGCTGCG CCCTAAGATC
ATCGCAATTA CCCGTCTGGT GGTGTCGGAA GCAGGCAGGG CTACCGATCT CAGCGCGATT
TACTTCGACA TCGGTCCGCG CCGGGTGCTG GACCGCTTCA TACAGATTTT CGAGACGATG
AAGATGTCAG GGAAACTTGT CCCACCCGAT AGCGCGCAGG CGGCGCGAGA ATTCAAGGCG
TTGTGCGAGG CCGGTCTTTA TGAACCTGTG CTGCTTGGTG TAGCCGGTAT TCCGAGCGAA
CGCGACATGG AGGCCAATGT CGCAGCCACG GTCGATATTA TGTGCACGAG GTATGGACCG
ACAAAATCGC GGCGGCGACC GAAAGCCCCT GCAAAACAGT CATCGACCAC CCGGGTGACA
CGCAGGAAAA AGCCGCCGGA CGGCGATGTC CTGCGCCAGC AGAATGATCT GCTACCCGAA
AAAGCTCACC AAGAGCAATC CTATAGAACT TGA
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| Protein sequence | MRVRTQAKRQ AIVDIAGSMF LRHGYAQVSM AAVAAEVGGS KGTLYGYFPS KADLFAAFVV
QAGEDAFAPL MDAIDKEQDA ANTLKALGMN YLRLLLRPKI IAITRLVVSE AGRATDLSAI
YFDIGPRRVL DRFIQIFETM KMSGKLVPPD SAQAAREFKA LCEAGLYEPV LLGVAGIPSE
RDMEANVAAT VDIMCTRYGP TKSRRRPKAP AKQSSTTRVT RRKKPPDGDV LRQQNDLLPE
KAHQEQSYRT
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