Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5943 |
Symbol | |
ID | 7381031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 959653 |
End bp | 960300 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649459 |
Product | hypothetical protein |
Protein accession | YP_002547690 |
Protein GI | 222106899 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCATT CCCCCATCTC GTCATTCATC CATCAGTTCG TTCCGGCGAC GGTGCCGAAC CTTGCGCCCT TGCTTTTGCT GCATGGAACA GGCGGCAACG AAAATGATCT CTTGTCGCTT GGCGCTGCCC TTTCACCGGG TGCGGCTCTC CTATCACCCC GTGGACAAGT CCTGGAACAC GGCATGCCAC GCTTCTTCAG ACGGTTGGCG GAAGGTGTGT TCGATGAAGA TGACCTGCGG GTGCGGGCAG CGGATCTGGC CGGCTTCATA AAGGAGGCCC GTGCGGCTCA TAACCTGGCA GCCCCGGTCG CCGTCGGTTT CTCCAATGGC GCCAATATTG CCGCGGCTCT GCTGTTGCTG CATCGCCAGG CCTTGGCTGG TGCGGTACTG TTGCGGGCCA TGACCCCGTT TAAATCGCCG CCGGTGGTGC ATGACACTGC CGATGGCGTG CCAGTTCTCA TCCTATCTGG AGCGATGGAT CCAATCGTTC CCGCAGACAA TGCAGAACGA TTGGTCGGCT CGCTTCAAGC TGTGGGCCAT ACGGTCAGCC ACGAAATCCT GCCGTCGGGG CATAATCTCA CTCAACTCGA TCTATCAATC AGCAAGCAGT TCCTCGACAC GAATTTCGCG CCGGCTGCTA CCACCTGA
|
Protein sequence | MTHSPISSFI HQFVPATVPN LAPLLLLHGT GGNENDLLSL GAALSPGAAL LSPRGQVLEH GMPRFFRRLA EGVFDEDDLR VRAADLAGFI KEARAAHNLA APVAVGFSNG ANIAAALLLL HRQALAGAVL LRAMTPFKSP PVVHDTADGV PVLILSGAMD PIVPADNAER LVGSLQAVGH TVSHEILPSG HNLTQLDLSI SKQFLDTNFA PAATT
|
| |