Gene Avi_5943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5943 
Symbol 
ID7381031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp959653 
End bp960300 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content59% 
IMG OID643649459 
Producthypothetical protein 
Protein accessionYP_002547690 
Protein GI222106899 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATT CCCCCATCTC GTCATTCATC CATCAGTTCG TTCCGGCGAC GGTGCCGAAC 
CTTGCGCCCT TGCTTTTGCT GCATGGAACA GGCGGCAACG AAAATGATCT CTTGTCGCTT
GGCGCTGCCC TTTCACCGGG TGCGGCTCTC CTATCACCCC GTGGACAAGT CCTGGAACAC
GGCATGCCAC GCTTCTTCAG ACGGTTGGCG GAAGGTGTGT TCGATGAAGA TGACCTGCGG
GTGCGGGCAG CGGATCTGGC CGGCTTCATA AAGGAGGCCC GTGCGGCTCA TAACCTGGCA
GCCCCGGTCG CCGTCGGTTT CTCCAATGGC GCCAATATTG CCGCGGCTCT GCTGTTGCTG
CATCGCCAGG CCTTGGCTGG TGCGGTACTG TTGCGGGCCA TGACCCCGTT TAAATCGCCG
CCGGTGGTGC ATGACACTGC CGATGGCGTG CCAGTTCTCA TCCTATCTGG AGCGATGGAT
CCAATCGTTC CCGCAGACAA TGCAGAACGA TTGGTCGGCT CGCTTCAAGC TGTGGGCCAT
ACGGTCAGCC ACGAAATCCT GCCGTCGGGG CATAATCTCA CTCAACTCGA TCTATCAATC
AGCAAGCAGT TCCTCGACAC GAATTTCGCG CCGGCTGCTA CCACCTGA
 
Protein sequence
MTHSPISSFI HQFVPATVPN LAPLLLLHGT GGNENDLLSL GAALSPGAAL LSPRGQVLEH 
GMPRFFRRLA EGVFDEDDLR VRAADLAGFI KEARAAHNLA APVAVGFSNG ANIAAALLLL
HRQALAGAVL LRAMTPFKSP PVVHDTADGV PVLILSGAMD PIVPADNAER LVGSLQAVGH
TVSHEILPSG HNLTQLDLSI SKQFLDTNFA PAATT