| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5931 |
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| Symbol | exoT |
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| ID | 7381021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 948856 |
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| End bp | 950334 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649449 |
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| Product | succinoglycan biosynthesis transport protein |
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| Protein accession | YP_002547680 |
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| Protein GI | 222106889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCAA CCGTCAATGC GAAATCCGTA ACCCGGAATG TCGGCTGGAG CGTCCTTTCC
AAGACAGGCA CTTTCGGGCT TAAATTTGTC ACGGTCCCGA TCCTGGCGCG CATTCTCACT
CCCGATCAAT TCGGTGCTGT CGCCGTTGCG CTAACCGTGG TGCAATTCCT GGCGATGATC
GGCGGTGCGG GTTTCGGTGC AGCTTTGGTC ATCCAGGAAA AGGAAGAGCC GGAGACGATC
CATTCTGTTT TCTGGGCGAA TTTGATCATT TCCTGCCTGA TGGCAACCCT CCTTTACGTG
TTTGCCGAAC CGATTTCGGC CATGCTGGGG GCGGTCGAGG CCGCGCCGCT GGTGCGCATC
ATGGCGGTGC TCATTCCGCT GCAACTCACC GGAGACGTTG CCTATGCTCT CCTGGCCCGG
CGCATGCAGT TCAGCCAGGA CGCGCTGTGG AGCATGATTT CCGAATCAGC CGGCGCACTG
ATTGCGGTCG GCATGGCCTT GATGGGTTAT GGGGTGATGG CGCTGGTGGC GCAATTGTTT
TCCTCCTCCA TCATCCGGCT TTGCGGGCTC TATTATGTAT CCGGTTATGT CCCGGGCTTT
GCCTTCAAGC CGCGTCGTAT CCTGGCGCTC GGTCGCTTCA GCCTCGGCAT GATGGGGTCG
GAAATCGCCA ATTTCATCAC CTTCCAGTCT CCTATGGTGG TGATTTCCCG CTATCTCGGC
CTGTCGGACG CTGGCGCTTA TTCCGCCGCC AACCGGTTTT CCAGCATTCC CAACCAGGTC
GTCCTGTCCG CTGTCATGGG CGTGCTGTTT CCCGCCTTCA GCACCATGAT GCATGACCGG
GATCGCCGCT CACAGGCGCT GATGTTGAGC ACCCAGGTGA CGACCGTGCT GCTGGCGCCG
ATGATGTTCG GCATGTGGGC ATTGGCCGAG CCGGCCATGT TGGTGCTGTT TGGACCGCAA
TGGGCCTGGG CCTGGCCGGT TCTCGGTCTG CTTGCTCTGT CGAAGGGCAT CCTCACGCCT
TGCAGCACGT TTATTCCCTA TCTAAAGGGC GTGGGGCACG GCGGTACGCT GTTCTGGTGG
GCCGTCATCC GGGCAATCGT CACCACCGTT GCCGTGGCGG TTGCCGCAGC TTTCGGAAAC
CTGGTCGATG CCATGGTGGC GCTGTGCATC GTCAATGTCG TCGTGCTCTT CGGCTATTCC
TGGGTGGTGT TCCGCGCCGA CCAGATGCCC TTCCTCAAGG GAATGTTTAT TTCCACACGG
CCGATGGTCA CCGCTCTGAT CATGGCTGGC ATGGTTCGCG CCCTTCTGCA TTTTTATGGG
TATCTGGTCC CCAATCCCGT ACTGCAAGTA TTGATTGGCG GATTGATAGG CGGCACAATC
TACGGTGTAT TCGTTGTTCT GACGGAGGCC GAATTGTTGA GAAAACTGAA AACCATGGTG
CGCAACCGCA GATCCACTGC CCCCGCACCT GCGGAATGA
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| Protein sequence | MPPTVNAKSV TRNVGWSVLS KTGTFGLKFV TVPILARILT PDQFGAVAVA LTVVQFLAMI
GGAGFGAALV IQEKEEPETI HSVFWANLII SCLMATLLYV FAEPISAMLG AVEAAPLVRI
MAVLIPLQLT GDVAYALLAR RMQFSQDALW SMISESAGAL IAVGMALMGY GVMALVAQLF
SSSIIRLCGL YYVSGYVPGF AFKPRRILAL GRFSLGMMGS EIANFITFQS PMVVISRYLG
LSDAGAYSAA NRFSSIPNQV VLSAVMGVLF PAFSTMMHDR DRRSQALMLS TQVTTVLLAP
MMFGMWALAE PAMLVLFGPQ WAWAWPVLGL LALSKGILTP CSTFIPYLKG VGHGGTLFWW
AVIRAIVTTV AVAVAAAFGN LVDAMVALCI VNVVVLFGYS WVVFRADQMP FLKGMFISTR
PMVTALIMAG MVRALLHFYG YLVPNPVLQV LIGGLIGGTI YGVFVVLTEA ELLRKLKTMV
RNRRSTAPAP AE
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