| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5925 |
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| Symbol | exoO |
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| ID | 7381015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 942115 |
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| End bp | 943110 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649443 |
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| Product | succinoglycan biosynthesis glycosyltransferase |
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| Protein accession | YP_002547674 |
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| Protein GI | 222106883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCT GGACCCCCGA CGTCACGGTG GTGATTGCCG CCTATAATAC CGGTGAAACC
ATCGAGCGCG CCATTGAAAG CGCGCTGTCG CAGGTTAATG TCACAGTCGA AGTTGTTGTT
GTCGACGATT GCTCATCCGA CGATACCCGT GAACGGGTCG CAGCCCTCAC CGATCCCCGC
GTTCGCTTGA TCGCATTGGA GCGTAATAAG GGCCCGGGCG GTGCCAGGAA TGCGGCAATA
GATGCCGCCC GTGGTCGCTG GGTCGCCGTA CTGGATTCAG ACGATACATT CAAACCGATG
CGGCTGTTTC GAATGATCGA GCGCGCCGAG GACGAAAAGG CCCAGGTCGT CGTCGATAAT
CTCGACGTGA TCGACATGAA TGGCACCTGC CGGACGATGT TTCTGGAAGA CGCGCTGGCG
CATATCGGCC AAATCGACCT GGCGCGGTTT ATCGGCTCCA ACATCCTGTT CCGATCCGAG
CATAATTTCG GCTATATGAA GCCTGTGTTC CTGCGCAGTT TCCTGAATGA CAAAGGCCTG
CGTTTCGACG AGAGCCTCAG GATCGGCGAG GATTATCTGC TGCTGGCTTC GGCCTTGGCC
GAGAATGCCA TCTGTACGAT AGAGCCGACT GCGGGTTACC TCTATTATAT CAGGGAGGGA
TCGATCTCGC GGGTGCTTCG TCTCCATCAT GTCGATGCAA TGATGGCCGC CGATGCCGGT
TTCATCTCAC GCTATCCGCT GAAAGGAGCA GCCCTTGCGG CCCAGACGGC TCGAACCCGC
AGCCTGAAGG AAGCACGCGC TTTCATAAAT CTGATCGATA GTCTCAAGGC ACGATCGGTG
TCGGGTGTTT TCAAGACCGC CCTTGCCAAT CCCTTGGCGC TGCGCCATCT GAAAATGCCA
ATCTCCGTTC GTCTCCGGCG ACTGATAAAG AGCCTGCAGA AAGACCGGAC ATCAACAGCC
GCTACCTCTT CTGCCGATCC GCCAATCAAG GGCTAA
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| Protein sequence | MIAWTPDVTV VIAAYNTGET IERAIESALS QVNVTVEVVV VDDCSSDDTR ERVAALTDPR
VRLIALERNK GPGGARNAAI DAARGRWVAV LDSDDTFKPM RLFRMIERAE DEKAQVVVDN
LDVIDMNGTC RTMFLEDALA HIGQIDLARF IGSNILFRSE HNFGYMKPVF LRSFLNDKGL
RFDESLRIGE DYLLLASALA ENAICTIEPT AGYLYYIREG SISRVLRLHH VDAMMAADAG
FISRYPLKGA ALAAQTARTR SLKEARAFIN LIDSLKARSV SGVFKTALAN PLALRHLKMP
ISVRLRRLIK SLQKDRTSTA ATSSADPPIK G
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