| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5924 |
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| Symbol | exoP |
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| ID | 7381014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 939138 |
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| End bp | 941474 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649442 |
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| Product | exopolysaccharide polymerization/transport protein |
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| Protein accession | YP_002547673 |
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| Protein GI | 222106882 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGA GAAGTTATCC CTATAAAGCC GTTCTGCAAC GGGAGCAGCC TGAAGCCGAT
TCCTTTATCG ATCTTGATAG ACTGCTGACC ATTGCCGTGC GCAGGGCCAG GATCGTCGGT
CTGTCGATCG CCCTCTTCGT GATGCTCGGC GTCACCTATC TGCTCTTCAC GACACCCTAT
TATACGTCGA TGACGCAGAT CCTGCTGGAT GATAGCCTGT CGCGCTACAC GCAAGACGAC
AAGGCAGCAC CCGGTGACCG TTCCCAGGCC GATACCGAAC TGGCCAGCGC CGTGGAAATC
CTTAAATCCA ACAGCATGGC CCTGCGGGTT GTCGATGAGG CCAAGCTCAG CGATAACGAG
CTGGTCACCA ATCCTCCTGC CTCGCCAGTC TCCTTCGTCA AGGACATGTT GCGATCCGTA
AAGAGACTGG TCAGCCCCGG ACCGAAATTA ACCGATGCGG AAATTGCAGC AGGCAAGCGC
GGCAAGGCCG CTGCCATGCT ACAGCAGAAC ATCACCGTGG AGCGGGTGAT GCGCAGTGCG
GTCATTGCCG TATCCTACCG CTCTCCTGAC CCTCTGCTGT CGGCGAAAGT CACCAAAGCC
TACGCAGATG CCTTCCTCAC TGATCAGTTG AATGCCAATT TCGACGCCAG TGAGCGGGCG
ACACTGTGGC TGCAAGGTCG CTTGGACGAC CTGGCAAAGC GTGCCCAACT AGCCTCGTTG
GACGTTGAGA AATACAAGGC AGAAAACGGC CTGACCCAAA CGGGCGGCGA ACTGATGTCC
GAACAACAGT TGACCGACCT CAACAAGCAG TTGATCGTTG CCCAGGCCGA TGCGGCAAGC
GCGCAGGCCC GCTACGAGCA ATATAAAAGC ATCGTCACGC AAGGCCCGCA AAATGCGGTC
AAGAATGCCA TCGTTTCCGG ACAGGCTGGC GCCAATCAGG TGCTCCAGGA TCTGCGAAGC
CGGTATTTGT CGATCGAAAA GCGTGAACAG GATATCGTTG CCAATTTTGG CCCGACCCAT
CCCCAGGCCA AAGCGCTGAA GGCTGAAAAA GACAATGTCG GCGGCCAGAT TTTCCAGGAA
CTGCAACAAC TGACGTCAAG CTATGGCAAT GAATTCGACG TTGCCAGATC GCGTGAGCAA
TCACTGCGCG GGAGCCTGGA GAAGTTGACC GGCACCAATT CCGACGCCAA TCGATCGCTT
GTGCATCTGA GAGAGCTTGA GCAGAAATCG TCAGCGCTCA AGACCCTCTA CGAAGCCTTC
CTGAATCGCT ACGAAGTGGC CAGCCAAAGC CAATCACTGC CGGCTGCCAA AGCACGGGTT
ATCTCGGAGG CTGGCATACC CGCCTCACCA TCCAGCCCGA AAAAGACAAT GGTGATCGCC
CTTTCCATGG TTCTCGGCCT GATGGCCGGT GCCGGGCTAG CCTTTCTTCA GGAAATGCAG
GAGCGGTATT TCCGGCTGGA AAGCGACGTA CGCACCACAC TTGGCCAAAA ATCTCTGGGT
TATCTGCCGC GTCTCGGTCC CAAGTTGAAA AAGCCGATCA ATCCCAAACT TGCCCGTTGG
CGTCAAAAAG CGCCTAAGGG AGCGACAGTC GTTCCTGGCG CGGAAAATGT ATCGCTCGAC
AGAATGATGC GAACCGTGAT CGAAGCGCCC CGATCCGCCT TCACAGAAAC CCTGCGCAAT
ACCAAGCTGG CCACCGATAT TATTCTACAG GGCAAGACAA GCCGCGTTAT CGGTGTCCTG
TCGGCACTTC CTGGCGAAGG TAAGTCTACG GTTGCAGCAA ATTTCGCCGT TCTGCTTGCC
TCCAGCGGCA AGCGGACATT GCTGATCGAC GCCGACTTAC GCAATCCGAG CCTCAGCCGG
CTTCTGCAGC CCGCCCCGAA AACCGGCCTC GTGCAGGCCG TGCTTGGTGA GGTCTCCTGG
CAGGATTGCA TCAAGGTCGA CCAGGAAACG AAACTTGCCG TCCTACCCAT CGTTCCCGGC
GCGGCAGCCC GATCTCTGGC TCATACCAAC GAGCTCATCG CATCGCCTGG AATGAATGCC
TTGCTCGAAA ATGTCCGCCA ATCGTTCGAT TACATCATCG TTGATCTTGC GCCGCTTGGC
CCAGTCGTCG ATGCCAAGGC CTTCGCCCCC TTGGCAGATG GTTTCGTCTT CGTTGTCGAA
TGGGGTAAGA CGCCTAAGAA GCTGGTGTCC GATCTACTCG AAGCAGAACC CCATATCAGC
AATAAGGTCC TCGGCGTTCT CTTGAACAAG ACAGACATGC AGACGCTGAC TCGCTATAGC
GACTTCGGCG GCTCAGAGAA ATTCCGCAAG CAATACAATA AATACTACGT GGAATGA
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| Protein sequence | MNERSYPYKA VLQREQPEAD SFIDLDRLLT IAVRRARIVG LSIALFVMLG VTYLLFTTPY
YTSMTQILLD DSLSRYTQDD KAAPGDRSQA DTELASAVEI LKSNSMALRV VDEAKLSDNE
LVTNPPASPV SFVKDMLRSV KRLVSPGPKL TDAEIAAGKR GKAAAMLQQN ITVERVMRSA
VIAVSYRSPD PLLSAKVTKA YADAFLTDQL NANFDASERA TLWLQGRLDD LAKRAQLASL
DVEKYKAENG LTQTGGELMS EQQLTDLNKQ LIVAQADAAS AQARYEQYKS IVTQGPQNAV
KNAIVSGQAG ANQVLQDLRS RYLSIEKREQ DIVANFGPTH PQAKALKAEK DNVGGQIFQE
LQQLTSSYGN EFDVARSREQ SLRGSLEKLT GTNSDANRSL VHLRELEQKS SALKTLYEAF
LNRYEVASQS QSLPAAKARV ISEAGIPASP SSPKKTMVIA LSMVLGLMAG AGLAFLQEMQ
ERYFRLESDV RTTLGQKSLG YLPRLGPKLK KPINPKLARW RQKAPKGATV VPGAENVSLD
RMMRTVIEAP RSAFTETLRN TKLATDIILQ GKTSRVIGVL SALPGEGKST VAANFAVLLA
SSGKRTLLID ADLRNPSLSR LLQPAPKTGL VQAVLGEVSW QDCIKVDQET KLAVLPIVPG
AAARSLAHTN ELIASPGMNA LLENVRQSFD YIIVDLAPLG PVVDAKAFAP LADGFVFVVE
WGKTPKKLVS DLLEAEPHIS NKVLGVLLNK TDMQTLTRYS DFGGSEKFRK QYNKYYVE
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