| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5888 |
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| Symbol | |
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| ID | 7380986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 897873 |
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| End bp | 899210 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649408 |
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| Product | oxidoreductase |
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| Protein accession | YP_002547645 |
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| Protein GI | 222106854 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTAC CCCTGTTGCG AGTAGAGACC CACACCACTT TGCCTGAGGC AGCGGATGTC
GTGGTGATTG GCGGCGGTAT CGTCGGGACC TGCACCGCCT ATTTCCTGGC AAAGCGCGGC
GTCAAAGTCG TGCTGCTGGA AAAGGGGTTG ATCGGGGCGG AGCAGTCCAG CCGCAATTGG
GGTTGGTGCC GCCAGCAGAA CCGCGATGCC CGCGAATTGC CGATGGCGAC GAAAAGCCTG
GATCTGTGGG AAAGTTTTGC CAGCGACATT GGCGAGGATG TCGGGTTTCG CCGCTGCGGC
CTGCTTTACC TGAGCAATAG CGAGGCGGAA ATCGCCACCT GGGCCAAATG GCGTGACTTT
GCCAAAATAG TCGGTGTCAC CACGCACATG CTTTCGGGCA AGGAAGCAGC CGAAAAAGGC
AGAGCGACGC GAAAGCCGTG GCTTGGCGGG GTGTTTTCGC CCAGCGATGG CATAGCGGTC
CCCGAAAGGG CTGCCCCTGT CATTGCGCGC GGCGTGATGA AATTTGGCGG AACCGTTATG
CAGCATTGCG CGGCCCGTGG GCTGGAAACC GAGGCTGGCC GGGTCAGTGC CGTGGTGACG
GAAAAGGGGA CGATCCGCAC GGGAACCGTG GTGATGGCGG GCGGCGCGTG GGCGTCTTCC
TTCTGCAATC AGTTGAACAT TCGCTTTCCG CAGGCGTCTA TCCGGTCCTC TATCCTTTCT
GTCGGTCCTC TTGACGGATT AGGTGCCGAA GCGTTGCCAG ACGCCCTGCA TACGGCGCGG
GTTTCCGTGA CCCGCCGGGG CGATGGCGGC TATACCTTGG CGATCAGCGG CCGTGCCAGC
GTCGATCTGA CCCCCCAGCA AATTCGCTAT GGCAAGGCTT TCCTGCCAAT GTTCCAGCGG
CGGTGGAGAA GCCTGAAGCC GGGTACGATC GAAGGTCTGC GCAATGGCCA TGAGACACTG
GCGAAATGGG CGTTGGACAA GGCGACGCCG ATGGAGCGTA ACCGTATTCT CGACCCGATA
CCGGATCGCA AACTGATCGC CGAAACCTAT CGCCGTGCCG GCGAATTGCT GCCTGCTTTG
GCTGGCGCAA AGATTTCGGC CAGTTGGGCT GGCTATATCG ACAGCACTCC AGATGGTGTG
CCCGCCATCG GTGAGGTTCC ATCTCTGCCG GGCTTTATCC TGGCGGCCGG ATTCAGTGGC
CATGGCTTTG GCATTGGGCC GGGGGCAGGG CATCTGATCG CCGACATCAT CACCGGTTCC
GAACCGATTG TCGATCCCAA AGACTATCGG CCCGAGCGGC TGGCTCATTC TGCCTGGGGC
AAGGTCGCGG GCTTCTGA
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| Protein sequence | MRVPLLRVET HTTLPEAADV VVIGGGIVGT CTAYFLAKRG VKVVLLEKGL IGAEQSSRNW
GWCRQQNRDA RELPMATKSL DLWESFASDI GEDVGFRRCG LLYLSNSEAE IATWAKWRDF
AKIVGVTTHM LSGKEAAEKG RATRKPWLGG VFSPSDGIAV PERAAPVIAR GVMKFGGTVM
QHCAARGLET EAGRVSAVVT EKGTIRTGTV VMAGGAWASS FCNQLNIRFP QASIRSSILS
VGPLDGLGAE ALPDALHTAR VSVTRRGDGG YTLAISGRAS VDLTPQQIRY GKAFLPMFQR
RWRSLKPGTI EGLRNGHETL AKWALDKATP MERNRILDPI PDRKLIAETY RRAGELLPAL
AGAKISASWA GYIDSTPDGV PAIGEVPSLP GFILAAGFSG HGFGIGPGAG HLIADIITGS
EPIVDPKDYR PERLAHSAWG KVAGF
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