| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5881 |
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| Symbol | |
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| ID | 7380651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 891039 |
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| End bp | 892148 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649401 |
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| Product | ABC transporter nucleotide binding/ATPase protein (spermidine/putrescine) |
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| Protein accession | YP_002547638 |
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| Protein GI | 222106847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.73775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTACG ACCTGGAACT AATCGATGTG GGCAAGGTCT ATGACAATGG CACCACGGCT
GTCAGTGCCT TCAGCCTGGC GGTGAAAAAG GGTGAGTTCA TCGCTTTTCT CGGCCCATCC
GGCTGCGGCA AGACCACGAC GCTGAGGATG ATTGCCGGGT TCGAGGGGAT TTCTTCCGGC
GATATGATGA TCAAGGGCGT GCGGATGAAC GACGTGCCGC CCCAGATGCG TCCGACCGCG
ACGATCTTTC AGAATTACGC GCTGTTTCCT CATATGAGCG TGCGCCGCAA CGTCGCCTAT
GGTCTTGAAG TCAAAGGCAT GGCCAAGGCC GAGCGCGACC GCAAAGTGGA GCGGATCATT
GCAACGCTGG GGCTTGAAGA CATAGCCGAG CGCAAGCCGG AAAAGCTTTC CGGCGGCCAG
CGCCAGCGGG TGGCCTTGGC GCGGGGATTG GTGATCGAGC CTGACATTCT GCTTCTGGAT
GAGCCGCTTG GCGCGCTTGA CGCCAATCTG CGCAAGGCGA TCCAGAACGA GCTGAAAATC
CTGCAACGGA CGCTGGGCGT CACCTTCATC TTCGTTACCC ATGCGCAATC GGAGGCGCTG
GCGCTGTCCG ACCGGGTGGT GGTGATGAAT CAGGGCCGAG TCGAGCAGGT CAGCCCGCCG
CATCAGCTCT ATACCCGGCC CGCCACGCCC TTTGTGGCGC AATTCATTGG CCGAAACGCG
ATTTTTAAAG GGCATGCCCG CGCCGATGGC ACAGGCGACT TACGGGTCGA GACCCCGGAG
GGATTGCTTG CAGGCCTGGT CAATGGCCCG GTATCCGACG GTGGCCTCGC CAATCTCGTC
GTTCCCGCCG AGGCCATTCA GGTTCATCAT GGAAACCGCG AGCCGCTTGA GCGGGTGGCT
GTGGCCCATG GTGGCAACGC GGTGCATGCC CGCATTCAAC GTGCCGACGT CGTCGGTCAT
GTCTCGCATA TCTCAGCGGT GCTGGCGGAT GGGCGGTCTC TGTCTCTCGA AGCTCATGTC
GAGAAATATC GCCCGGATGA GTTTCCGGTC GGCTCCGACG TGTTTCTGTC GTGGAAGCCT
TCGGATGCCA CCATTATCGC CGCACACTGA
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| Protein sequence | MIYDLELIDV GKVYDNGTTA VSAFSLAVKK GEFIAFLGPS GCGKTTTLRM IAGFEGISSG
DMMIKGVRMN DVPPQMRPTA TIFQNYALFP HMSVRRNVAY GLEVKGMAKA ERDRKVERII
ATLGLEDIAE RKPEKLSGGQ RQRVALARGL VIEPDILLLD EPLGALDANL RKAIQNELKI
LQRTLGVTFI FVTHAQSEAL ALSDRVVVMN QGRVEQVSPP HQLYTRPATP FVAQFIGRNA
IFKGHARADG TGDLRVETPE GLLAGLVNGP VSDGGLANLV VPAEAIQVHH GNREPLERVA
VAHGGNAVHA RIQRADVVGH VSHISAVLAD GRSLSLEAHV EKYRPDEFPV GSDVFLSWKP
SDATIIAAH
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