| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5870 |
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| Symbol | |
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| ID | 7380643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 882645 |
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| End bp | 883622 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649393 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547630 |
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| Protein GI | 222106839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.832684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATTA AGGTTTTGCA TCAAGGGCTT GCCACCACGG TTCAGGATTT GGGCCGTCCC
GGCTATTTTC ACCTCGGCAT TCCCCAGGGC GGGGCTATGG ATCGGCTGGC GCTGAAGGCC
GCCAATCTGC TCGTCGGCAA TGACGAAGGG GCGGCGGGGC TGGAGGCGGT GTTCATCGGG
CCAAAGCTGG AATTTGCCGC CGACACCATG GTCGCCGTCA CGGGAGCCGA GATGCCGATC
CGGCTGGACG GCGAGGAGCA GCCCGGCTGG ACCGCCTTCA AGGTGCGGGC AGGTCAGGTG
CTGAGTTTCG ATTTCCTGAA GGCGGGGGCG CGGATCTATA TTGCCGTTGC TGGTGGTATC
GATGTTCCGC TGGCGCTCGG ATCACGCTCC ACCTACGCCA TAGGCGCGCT TGGTGGCTTT
CAGGGGCGTG CGATTGCTGC TGGAGATCAA TTGCCGGTCG GGCAGGCGAA GCCTGTATCG
GAAGGCCGGA TCATTCCGCA GGCGCTGCGC CGCCGTCCGG GCGCACCTGC CGAACTGCGG
GTGTTGCCCG GTCTCTATTG GGATCGGTTG ACGGAAGAGG CAAAAGGCAA TTTCTTTGAA
GACGAATGGA AGGTGGCACC GGAAGCCGAC CGGATGGGCT ACCGGTTTCG CGGTGGGCGC
AAGCTGGACT TCGTGCCCCG CACCCCGCCG TTTGGGGCGG GTTCCGACCC ATCCAATATT
GTCGATAGCT GCTATCCCTA TGGCTCGATC CAGGTGCCGG GCGGCAGCGA GCCGATCGTC
TTGCACCGTG ACGCCGTTTC CGGCGGCGGC TATTTCATGG TCGGCACGGT GATTTCAGCG
GATATGGACC TGATCGGCCA ATTGCAGCCT CATACGCCAA CGCGGTTCGT CAAGGTGGAT
ATGGAACAGG CATTGGCGGC GCGTCGTGAG CGGCAGGCGA TGATCCGTGA CATCAGCGCC
TCTCTGTCAA ACGTGTAG
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| Protein sequence | MVIKVLHQGL ATTVQDLGRP GYFHLGIPQG GAMDRLALKA ANLLVGNDEG AAGLEAVFIG
PKLEFAADTM VAVTGAEMPI RLDGEEQPGW TAFKVRAGQV LSFDFLKAGA RIYIAVAGGI
DVPLALGSRS TYAIGALGGF QGRAIAAGDQ LPVGQAKPVS EGRIIPQALR RRPGAPAELR
VLPGLYWDRL TEEAKGNFFE DEWKVAPEAD RMGYRFRGGR KLDFVPRTPP FGAGSDPSNI
VDSCYPYGSI QVPGGSEPIV LHRDAVSGGG YFMVGTVISA DMDLIGQLQP HTPTRFVKVD
MEQALAARRE RQAMIRDISA SLSNV
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