| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5868 |
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| Symbol | accC |
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| ID | 7380641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 880392 |
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| End bp | 881780 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649391 |
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| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
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| Protein accession | YP_002547628 |
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| Protein GI | 222106837 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTT CGTCGCTGAT GGTGGCCAAC AGGGGGGAGA TTGCCGTTCG GATCATCCAG
GCGGCCAAGG CGCTCGGCAT TCGCACCGTG CAGGTTCATT CCGCCGCAGA CCGTGACATG
CTGGCGGTGA AACTGGCCGA TCAGGCGGTG GAGATTGGCC CGCCATCGGC GGCCAAATCC
TACCTGAATA TCGAGGCCGT GCTGAAAGCG GCACTGGAAA CCGGCGTTGA TGCGGTGCAT
CCGGGCTATG GATTCCTCTC CGAAAATGCC GCTTTCGCCA AGGCTGTCAC CGATGCCGGG
CTGATTTTCA TTGGTCCGAG CCATGAAGCC ATCAGCCTGC TTGGCGACAA GGTCGAGGCC
CGCAAGGTGG CGATGCAGGC CGGTGTGCCG ACTGTGCCGG GCTCGAATGG CCGGGTGGAT
GATCTGGATG CAGGTCGTGC GATTGTCGAG ACGATCGGCT TTCCTGTGAT GATCAAGGCC
GCTGCGGGCG GCGGCGGTCG AGGCATTCGG ATCGCCGAGA CCATGGAGGA TTTCGAACGG
CATTTCCCGC AAGCGTCCTC CGAAGCGCTG GCTGCCTTTG GCGATGGCGG GCTTTATATC
GAGAAGGTCA TTACCCGCGC GCGCCATGTC GAAGTGCAGA TCCTCGGTGA TGGAGAAAAT
GCCATTCATT GCTTTGAGCG GGAATGTTCG CTGCAACGCC GCCGCCAGAA GGTCTGGGAA
GAAGGCCCAT CCGTGCGCCT GCCTGATGAT GTGCGAAAAG CCCTGTGCGA TAGCGCGGTG
GCGCTGGCGC GGTCGGTTCA CTATCGCGGC GCGGGCACGG TTGAATATCT CTATGATGAG
CAGAGCGGCG AATTTTACTT TATCGAGGTC AATACCCGCA TCCAGGTCGA GCATCCGGTG
ACGGAAATGA TTACCGGTAT CGATCTGGTG CAGGAAATGA TCCGCATTGC CGGTGGCGCG
TCTTTGTCGC TGCGTCAGGA GGATGTGGTG CTCTCCGGCC ACGCTATCGA ATGCCGGATC
AATGCCGAGG ACCCGGCGCG GGGTTTCTTG CCCGGTCCCG GCACGGTCTC AACCCTGCAC
ATTCCCGAGG GCAACGGCAT CCGCTTCGAT ACCATGCTCT ATGAAGGCTA TCAGGTGCCG
CCCTTCTACG ATTCCCTGCT CGGCAAGCTG ATCGTCTGGG CGGAAACCCG TGAAGCCTGC
CTGGAAAAGC TTGGCGCGGC GCTGGAGCAT TTCGAGATCG GCGGTCTTGC CACCACCATT
CCGCTGCACA AAAAGCTGGT GGCTGATCCC TCCGTGCGAA GCGCCGATGT CCATACCCGG
TTTCTGGAGC CGTGGCTGGA AACAGCCTTT CCGCCTGCCC AATCTGTTCC CCTGAAGGAG
ACTGTCTGA
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| Protein sequence | MSISSLMVAN RGEIAVRIIQ AAKALGIRTV QVHSAADRDM LAVKLADQAV EIGPPSAAKS
YLNIEAVLKA ALETGVDAVH PGYGFLSENA AFAKAVTDAG LIFIGPSHEA ISLLGDKVEA
RKVAMQAGVP TVPGSNGRVD DLDAGRAIVE TIGFPVMIKA AAGGGGRGIR IAETMEDFER
HFPQASSEAL AAFGDGGLYI EKVITRARHV EVQILGDGEN AIHCFERECS LQRRRQKVWE
EGPSVRLPDD VRKALCDSAV ALARSVHYRG AGTVEYLYDE QSGEFYFIEV NTRIQVEHPV
TEMITGIDLV QEMIRIAGGA SLSLRQEDVV LSGHAIECRI NAEDPARGFL PGPGTVSTLH
IPEGNGIRFD TMLYEGYQVP PFYDSLLGKL IVWAETREAC LEKLGAALEH FEIGGLATTI
PLHKKLVADP SVRSADVHTR FLEPWLETAF PPAQSVPLKE TV
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