| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5852 |
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| Symbol | |
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| ID | 7380630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 869830 |
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| End bp | 871107 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649380 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547617 |
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| Protein GI | 222106826 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0575384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCAAA ATAAGCTCGC CACCGCAGAC ACGAATTTAG AAGCCAACGG CGATCCGGGA
ACGCCAAAAT CGGCCAAGGC AAAGCGTTAC GCCTTGCTAT CGGCCATGTT CCTGATGTCG
ATGTCGGCTG TTGGCCCAGG TTTCATTACT CAGACAGCCA CTTTCACCGT CAAGCTCGGT
GCAGCTTTTG CCTTCGGCAT CTTCGTTTCC ATTATTATCG ATTTCATCGT CCAGGCGAAC
ATCTGGCGGC TCGTCACAGT CACCCGCATG CGCGCCCCGG CCATTGCCAA CAGCGCCATT
CCCGGCTCAG GCTACGTGCT GGCCGTGCTG GTCATCATTG GCGGGTTGTT CTTCAATATC
GGCAATATCG GCGGCGCGGG TCTGGGTTTT AACGCCATGA TCGATCTCGA TCCGAAGATC
GGCGGTGCCA TCGGCGCACT TGCGGCCATC GGTATTTTCC TGTCTCGCCG GGCAGGTGTC
GCCATGGACC GGGTGGTCTT TGTCGCGGCT TTCGTCAAAC TCGCCCTCAT TCTCTATGCA
GCAATCGTCT CCGGCCCGCC GGTTGCCGAA GCGCTGCGCC AGACCATTTT GCCCGACACG
ATTGATTTCG CCACCATCAC CACTATCGTC GGCGGCACCG TCGGCGGCTA TATTACCTAT
GCTGGTGCCC ACCGCCTGCT CGACAAAGGC ATGGGCGGCG TTGAGAATAT CGGTGCCGTC
AACCGCGCGG CGTTCAGCGG CATCGCCATT ACCGGCGTGC TACGTTACAT CCTGTTTCTC
GCCATTCTCG GCGTTGTCGC CAGCGGCACG GTCATCGACC TGTCTGGTAA GGCTGCCAAT
CCGGCAGGCC AGGCCTTCCA TGCGGCTGCC GGCAATATCG GCTTTCGTCT GTTCGGCGCG
GTGCTGCTGG CATCGGCCAT GACCAGCATT ATCGGTGCAG CCTATACATC CGTGTCATTT
CTAACTGCCT TCAAGAAGGA CATGACAGAG CGTCAGCGCA ATTTTGCCAC TGTCGGCTTC
ATCGCCTTCT CACTGATAAG CTACATGCTG ATCACCACCC CGCCCGCGGC CATGCTGGTC
TTCGTTGGCG GCCTGAACGG TCTCGTCCTG CCTATCGGCC TGTCGATCTT CATCTATGCC
GCCTGGGCGC GCTCCGACCT GATGGGCGGC TATCGTTATC CGCGCTGGCT TTTGATCCTC
GGCGTCCTCA CCTGCGCGCT GACATGGTAC ATGGCCTATA AATCGGTCGG GCCAATCTTT
GCCCTGCTTG GCCTGTAA
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| Protein sequence | MGQNKLATAD TNLEANGDPG TPKSAKAKRY ALLSAMFLMS MSAVGPGFIT QTATFTVKLG
AAFAFGIFVS IIIDFIVQAN IWRLVTVTRM RAPAIANSAI PGSGYVLAVL VIIGGLFFNI
GNIGGAGLGF NAMIDLDPKI GGAIGALAAI GIFLSRRAGV AMDRVVFVAA FVKLALILYA
AIVSGPPVAE ALRQTILPDT IDFATITTIV GGTVGGYITY AGAHRLLDKG MGGVENIGAV
NRAAFSGIAI TGVLRYILFL AILGVVASGT VIDLSGKAAN PAGQAFHAAA GNIGFRLFGA
VLLASAMTSI IGAAYTSVSF LTAFKKDMTE RQRNFATVGF IAFSLISYML ITTPPAAMLV
FVGGLNGLVL PIGLSIFIYA AWARSDLMGG YRYPRWLLIL GVLTCALTWY MAYKSVGPIF
ALLGL
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