Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5847 |
Symbol | |
ID | 7380627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 866477 |
End bp | 868102 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643649377 |
Product | hypothetical protein |
Protein accession | YP_002547614 |
Protein GI | 222106823 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0879773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTC TCCCCGTCAG CCTGACGACG ATGCTGGTCG AGCTTGCCAA TCTCGATGAG ACCTTGGCTC TGTTCGCCTC GCTTCAGGCA AGCCCCATCC CCGGCATCGA TGAAATGGTA CCCGCCGCTC GGACCTTGAT GATCCGGTTT CGCCCGCAGA CCATCAGCGC GCAAGCCCTG GCGGCTGAGG TTAGCACCCG CGACCTGTCC GCCAAACTGG CCCCATCCGA TCATCTGGTC GAAATACCCG TAGACTATGA CGGCGAAGAT CTGGCCGACG TGGCGGAACT GACCGGGCTT GCCGTGGAAG AGGTTATCCG CCGCCATACG GAAAGCACGT TTACGGTTGC TTTTTGTGGC TTTGCGCCGG GCTTCGGCTA TCTCGTCGGC GGCGACCCGG CCTTGCATGT GCCGCGCCGC AAAAGCCCGC GCACCCGCAT TCCCGCTGGC GCCGTGGCAC TGGCAGGTGC CTTCAGCGGT GTCTATCCGC AGGCCAGCCC CGGCGGTTGG CAAATCATCG GCGTGACACC GGAGAAAATG TGGGATCTCA GCCGCGATCC GCCAGCACTG TTTCAGCCCG GCTATCAGGT GCGCTTCACC GATATGGCAA AAGCGGTCCA TCCGGTTGTT ATTCCTGCAA GCGATGAAGC CCCTAGCAAT CCGGCTGATG GGCTTTCCGA GACGAATGGC GCGGGGCATT TGACCGTGCT TGCCGCCCCC ATGCCTGCGG TGTTCCAGGA CCTTGGCCGT CTCGGCCAGA CCGGCCAGGG CGTTTCCGCC TCCGGTGCTC TGGACCAGGG AGCCTTGAAG GCAGCCAATC GCGTGGTGGG CAATCCATCG GGCCTCCCCT GTCTGGAAAT CACCCTTGGT GGCTTTTCTT TTGAAAGCGA TAGCCGCGCC GTCATCGCGC TGACCGGTGC GCCCTGCCCG GTCGCTATTC GGGATGCCTC GGGTCGGGTG ATGCAAGCTG AAACCTATCA GCCGATTGCG CTGGAACCCG GCGATATCGT CAGCCTTGGC CAGCCTCCAC AGGGCATGCG CAGCTATCTT GCCGTGCGCG GTGGTTTTGC GGTCCAGCCG GTGCTGGGCA GCTATGCCAC CGATACGCTG GCCGTGGTCG GACCTGAGCC GGTGACGGCA GGCACGGTTC TGACGCTGAA GGGCAACAGC GAGGGTCTCG CCGCCGTTTC CCTGCATGAA TCTCCACCGC AAGATCTGCC GAGCGCAGGC GATATCGTCA CGCTGGACGT CGTGCTTGGG CCGCGCACCG ATTGGTTCAC CGAAAAAGGT CTGGCGACGC TGACGGACCA GCTTTGGCAG GTGACGCCGC AATCCAGCCG CGTCGGTATC CGGCTTGCGG GCGACGTGCC GCTGGAGCGG ATCGACAGCG CCGAACTGCC AAGCGAAGGC ACCGCCACCG GTGCCATTCA GGTGCCGCAT AGCGGCCAGC CGGTGCTGTT TCTGGCAGAC CATCCGCTGA CCGGTGGCTA TCCCGTCATC GGCACGGTTG CCGAATATCA TCTGGATCTT GCGGGACAGA TCCCGATCAA CGCCCGCATC CGCTTCCGGC CCATTGCCCC TTTCGCAGAC ATCACCCCTG TCGATGCCCC AGCCGCGAAC GCATAG
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Protein sequence | MRFLPVSLTT MLVELANLDE TLALFASLQA SPIPGIDEMV PAARTLMIRF RPQTISAQAL AAEVSTRDLS AKLAPSDHLV EIPVDYDGED LADVAELTGL AVEEVIRRHT ESTFTVAFCG FAPGFGYLVG GDPALHVPRR KSPRTRIPAG AVALAGAFSG VYPQASPGGW QIIGVTPEKM WDLSRDPPAL FQPGYQVRFT DMAKAVHPVV IPASDEAPSN PADGLSETNG AGHLTVLAAP MPAVFQDLGR LGQTGQGVSA SGALDQGALK AANRVVGNPS GLPCLEITLG GFSFESDSRA VIALTGAPCP VAIRDASGRV MQAETYQPIA LEPGDIVSLG QPPQGMRSYL AVRGGFAVQP VLGSYATDTL AVVGPEPVTA GTVLTLKGNS EGLAAVSLHE SPPQDLPSAG DIVTLDVVLG PRTDWFTEKG LATLTDQLWQ VTPQSSRVGI RLAGDVPLER IDSAELPSEG TATGAIQVPH SGQPVLFLAD HPLTGGYPVI GTVAEYHLDL AGQIPINARI RFRPIAPFAD ITPVDAPAAN A
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