| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5841 |
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| Symbol | metF |
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| ID | 7380623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 861121 |
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| End bp | 862011 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649373 |
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| Product | methylenetetrahydrofolate reductase |
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| Protein accession | YP_002547610 |
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| Protein GI | 222106819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.369115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACA AAGCGGTTCT GACGGATCAT CGCGAATATC CTGCCGATCA GGGCAATCTT
CTGGACGCAT GGTCCATTGA GGTCACTCCG CGGACGGCAG CGAAAATCGC CAGTTTTCAG
GCGCTGCTGC CAGCGGGGAC CCGAATCTAT ATCGCCCATG TCGATGGCAC ACCTTTCGAG
GACATGGTCG CGACCGCCAG GCGCCTTCAT GGGCAAGGCT TTCCGGTCAT GCCGCATATT
CCAGCTCGCA GTATCGCCGA TGTCACGCAA CTGGAAGACC TGTTAAAGCA ATACCGGGAT
GAAGCCGATG TGCGCCAGGC ACTTCTGCTG GCCGGCGGCA TCGCAAAGCC ACGCGGCACG
CTTTCCAGTT CGATGGAGCT GATTGAAACC GGCTTGTTCG ACAGGCTCGG CTTTACGCAT
CTGCATATTG CCGGCCACCC CGAAGGCAAC CGCGATATCG ATGCCGATGG CTCCACCACA
CAAATCGATG CGGCCCTGCG CTGGAAGTTC GACTTCTCCA GCCGGACGGA TGCGCAGATG
GCCATTGTCA CCCAATTTGC CTTCGATGCC AAAGTGATCA TCGACTGGGC CGAGCGAATC
GACGCCCTCG GGATCGGATT GCCGATCCAT GTCGGCATTG CCGGACCTGC AAAGCTCCAG
ACATTGATCA AATATGCAAT CTCCTGCGGG GTCGGGCCGT CTTTGAAAGT GCTGCAAAAA
CGCGCGCTCG ACCTGCGCAA ACTGCTAATG CCTTATGAGC CGACGGACAT GGTTGGGCAG
TTGATCGCCT ACAAGGCCGA AAATCCGCAG AGCAACATCA GCAAGCTGCA TCTGTTTCCG
CTTGGCGGCA TCGAGCCTGC GGCCCGTTGG ATCGACCAAT ATAAGCCCTG A
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| Protein sequence | MMDKAVLTDH REYPADQGNL LDAWSIEVTP RTAAKIASFQ ALLPAGTRIY IAHVDGTPFE
DMVATARRLH GQGFPVMPHI PARSIADVTQ LEDLLKQYRD EADVRQALLL AGGIAKPRGT
LSSSMELIET GLFDRLGFTH LHIAGHPEGN RDIDADGSTT QIDAALRWKF DFSSRTDAQM
AIVTQFAFDA KVIIDWAERI DALGIGLPIH VGIAGPAKLQ TLIKYAISCG VGPSLKVLQK
RALDLRKLLM PYEPTDMVGQ LIAYKAENPQ SNISKLHLFP LGGIEPAARW IDQYKP
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