Gene Avi_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5833 
SymbolhyuB 
ID7380617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp853063 
End bp854754 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content59% 
IMG OID643649367 
Producthydantoin utilization protein 
Protein accessionYP_002547604 
Protein GI222106813 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGG GCAGGCACCC ATTCGATCCG GTGACCCAGG AAATCATCGA GGGCAAGTTG 
ATTGCCACCG TCGATGAAAT GGGCATCGTT ATGGCCCGCA CCAGCATGAG CCCGGTGATC
TACGAAGTGC TGGATTTTGC CTGCGGTGTC TTGACGGCAA AGGGTGAGTT GATCGCCCAG
ATGAACGGCA TCACTCTGTT TACCGGCACG TTCGGCCGTC AGGTCAAGTC GCTGATCGAC
CGTTTCGGGG CGGATATGGC CGATGGCGAT ATTTTGTTGA CCAACGATCC CTATGCCGGC
GGGACGCATG CTTGCGATTT TGCGATCGTC AAGCCGATTT TCGTCGATGA CGTGCTGCTC
GCCTTTGCCA TTAATGTCGC TCATTATCTC GATGTTGGCG GATCGGTTCC GGGCAGTCTT
TCGCCTGCTG CAACCTCGGT TTATCAGGAA GGTCTGCGGT TGCCGGGCGT CAAAATCGTT
CGCAACGACA TGCTTTCCTC TGACATTCTG CACATCATCT CGGAAAATGT CCGCATGCCC
GAGATCGCGC TTGGCGATTT GACGGCACAG ATCGCCACAG TGCGGGTTGC GGCCCGGCGC
ATGAAAGAAT TCACTGCCAA ATACGGCGCT CCCACCTTGA TCGCCGCATT CGACCATATC
CTCAATGTCA GCGAACGGCA GAGCCGTCAG GCAATTGCCG CACTTCCCGA CGGCATTTAC
CGGGCCAGCG ACATTATCGA TGGCGATGGC GTCACAGTCG ATCCGATTGC CGTGCAAGTG
GCGGTGACCA TTGCTGGCGA TCAAATCACC GCTGATTTCA CCGGTTGTCC TCCCGCCGTG
GCGGGACCGA TCAATTGCTC ACGAGGCGCG CTGGAATCGG CAGTCAGGAC GATCCTGAAG
GCGCTTGTGG CACCGCAGTC GCCATCAAAC GAGGGCTGGT TCCGGCCTTT GACTGTGATC
GCGCCACAAG GAACCGTGTT TACCGCCGAA AAACCCTCAC CGACCGGATG GTATTACGAG
GGCTCGGTCC ATGCTTCGGA ACTGGTCTGG AAGGCGCTGG CGGCGCTGGT GCCGGAGCGG
TTTTCCGCCG GTTCCTATTC CAGCCTTTGT GTCGCCTATA TCTCAGGAAA TGACCGTAGT
GGCCGACCGT TCATTCACAT CGAGCCGCAG CATGGCGGCT GGGGTGCGAG TATCAACAGG
GACGGCGCCA ATGCGCTGAT TTCGCTGACG GATGGCGATA CCTACAATTA TTCCGTCGAA
GTGATCGAAG CGCGTTTTCC TTTGCTGGTG CGGCGGTATG GCCTGAATAT CGAAGGTGGC
GTCGGGGCTG GGCGGATGCG CGGCGGTTTC GGGATCATCA GGGAATATGA GATCCTCGGC
GACAAGGCCT CTGCCTATTG CAGCTTTGGC CGCACCCGCA CCCTGCCATG GGGCATGGAC
GGCGGCCATG ATGGTACGGC CAATAGCCTT CAGGTTCTGG CCGCATCGGG CGAAAACGCC
TGCTATGGCC GCTCTGCCGA TATTGCGCTG AGGACGGGCG ATGTCGTGCG CATCGTCACC
GGTGGCGGTG GTGGATGGGG CGATCCCGGC GATCGCGATC CGGCTTTGAT TGAAACAGAT
TTGAAGAATG GTTTTGTCAG CGCGGAGGCA GCGACCAGCC TCTATGGTTA CCGTGGGAGG
ATTGAAGAAT GA
 
Protein sequence
MMAGRHPFDP VTQEIIEGKL IATVDEMGIV MARTSMSPVI YEVLDFACGV LTAKGELIAQ 
MNGITLFTGT FGRQVKSLID RFGADMADGD ILLTNDPYAG GTHACDFAIV KPIFVDDVLL
AFAINVAHYL DVGGSVPGSL SPAATSVYQE GLRLPGVKIV RNDMLSSDIL HIISENVRMP
EIALGDLTAQ IATVRVAARR MKEFTAKYGA PTLIAAFDHI LNVSERQSRQ AIAALPDGIY
RASDIIDGDG VTVDPIAVQV AVTIAGDQIT ADFTGCPPAV AGPINCSRGA LESAVRTILK
ALVAPQSPSN EGWFRPLTVI APQGTVFTAE KPSPTGWYYE GSVHASELVW KALAALVPER
FSAGSYSSLC VAYISGNDRS GRPFIHIEPQ HGGWGASINR DGANALISLT DGDTYNYSVE
VIEARFPLLV RRYGLNIEGG VGAGRMRGGF GIIREYEILG DKASAYCSFG RTRTLPWGMD
GGHDGTANSL QVLAASGENA CYGRSADIAL RTGDVVRIVT GGGGGWGDPG DRDPALIETD
LKNGFVSAEA ATSLYGYRGR IEE