Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5833 |
Symbol | hyuB |
ID | 7380617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 853063 |
End bp | 854754 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649367 |
Product | hydantoin utilization protein |
Protein accession | YP_002547604 |
Protein GI | 222106813 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGG GCAGGCACCC ATTCGATCCG GTGACCCAGG AAATCATCGA GGGCAAGTTG ATTGCCACCG TCGATGAAAT GGGCATCGTT ATGGCCCGCA CCAGCATGAG CCCGGTGATC TACGAAGTGC TGGATTTTGC CTGCGGTGTC TTGACGGCAA AGGGTGAGTT GATCGCCCAG ATGAACGGCA TCACTCTGTT TACCGGCACG TTCGGCCGTC AGGTCAAGTC GCTGATCGAC CGTTTCGGGG CGGATATGGC CGATGGCGAT ATTTTGTTGA CCAACGATCC CTATGCCGGC GGGACGCATG CTTGCGATTT TGCGATCGTC AAGCCGATTT TCGTCGATGA CGTGCTGCTC GCCTTTGCCA TTAATGTCGC TCATTATCTC GATGTTGGCG GATCGGTTCC GGGCAGTCTT TCGCCTGCTG CAACCTCGGT TTATCAGGAA GGTCTGCGGT TGCCGGGCGT CAAAATCGTT CGCAACGACA TGCTTTCCTC TGACATTCTG CACATCATCT CGGAAAATGT CCGCATGCCC GAGATCGCGC TTGGCGATTT GACGGCACAG ATCGCCACAG TGCGGGTTGC GGCCCGGCGC ATGAAAGAAT TCACTGCCAA ATACGGCGCT CCCACCTTGA TCGCCGCATT CGACCATATC CTCAATGTCA GCGAACGGCA GAGCCGTCAG GCAATTGCCG CACTTCCCGA CGGCATTTAC CGGGCCAGCG ACATTATCGA TGGCGATGGC GTCACAGTCG ATCCGATTGC CGTGCAAGTG GCGGTGACCA TTGCTGGCGA TCAAATCACC GCTGATTTCA CCGGTTGTCC TCCCGCCGTG GCGGGACCGA TCAATTGCTC ACGAGGCGCG CTGGAATCGG CAGTCAGGAC GATCCTGAAG GCGCTTGTGG CACCGCAGTC GCCATCAAAC GAGGGCTGGT TCCGGCCTTT GACTGTGATC GCGCCACAAG GAACCGTGTT TACCGCCGAA AAACCCTCAC CGACCGGATG GTATTACGAG GGCTCGGTCC ATGCTTCGGA ACTGGTCTGG AAGGCGCTGG CGGCGCTGGT GCCGGAGCGG TTTTCCGCCG GTTCCTATTC CAGCCTTTGT GTCGCCTATA TCTCAGGAAA TGACCGTAGT GGCCGACCGT TCATTCACAT CGAGCCGCAG CATGGCGGCT GGGGTGCGAG TATCAACAGG GACGGCGCCA ATGCGCTGAT TTCGCTGACG GATGGCGATA CCTACAATTA TTCCGTCGAA GTGATCGAAG CGCGTTTTCC TTTGCTGGTG CGGCGGTATG GCCTGAATAT CGAAGGTGGC GTCGGGGCTG GGCGGATGCG CGGCGGTTTC GGGATCATCA GGGAATATGA GATCCTCGGC GACAAGGCCT CTGCCTATTG CAGCTTTGGC CGCACCCGCA CCCTGCCATG GGGCATGGAC GGCGGCCATG ATGGTACGGC CAATAGCCTT CAGGTTCTGG CCGCATCGGG CGAAAACGCC TGCTATGGCC GCTCTGCCGA TATTGCGCTG AGGACGGGCG ATGTCGTGCG CATCGTCACC GGTGGCGGTG GTGGATGGGG CGATCCCGGC GATCGCGATC CGGCTTTGAT TGAAACAGAT TTGAAGAATG GTTTTGTCAG CGCGGAGGCA GCGACCAGCC TCTATGGTTA CCGTGGGAGG ATTGAAGAAT GA
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Protein sequence | MMAGRHPFDP VTQEIIEGKL IATVDEMGIV MARTSMSPVI YEVLDFACGV LTAKGELIAQ MNGITLFTGT FGRQVKSLID RFGADMADGD ILLTNDPYAG GTHACDFAIV KPIFVDDVLL AFAINVAHYL DVGGSVPGSL SPAATSVYQE GLRLPGVKIV RNDMLSSDIL HIISENVRMP EIALGDLTAQ IATVRVAARR MKEFTAKYGA PTLIAAFDHI LNVSERQSRQ AIAALPDGIY RASDIIDGDG VTVDPIAVQV AVTIAGDQIT ADFTGCPPAV AGPINCSRGA LESAVRTILK ALVAPQSPSN EGWFRPLTVI APQGTVFTAE KPSPTGWYYE GSVHASELVW KALAALVPER FSAGSYSSLC VAYISGNDRS GRPFIHIEPQ HGGWGASINR DGANALISLT DGDTYNYSVE VIEARFPLLV RRYGLNIEGG VGAGRMRGGF GIIREYEILG DKASAYCSFG RTRTLPWGMD GGHDGTANSL QVLAASGENA CYGRSADIAL RTGDVVRIVT GGGGGWGDPG DRDPALIETD LKNGFVSAEA ATSLYGYRGR IEE
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