| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5820 |
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| Symbol | |
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| ID | 7380606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 842373 |
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| End bp | 843848 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649356 |
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| Product | monocarboxylic acid permease |
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| Protein accession | YP_002547593 |
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| Protein GI | 222106802 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTG AGATCGATCC CACGGCGCTT GCCGTCTTCA TCTTCTTCTT CGCGCTTGTC
ACCGTCATGG GTTTTGTCGC CTCGCGCTGG CGCAAGCCGG AGACCATGGC CCATATCGAT
GAATGGGGTC TGGGCGGGCG CAAATTCGGC ACATGGATCA CCTGGTTTCT GGTGGGTGGC
GATTTCTATA CCGCTTATAC GGTCATTGCC GTTCCGGCGC TGGTCTATGC GGTGGGTGCC
TATGGCTTCT TCGCGCTACC CTACACGATC ATTGTCTATC CCTTCGTGTT TCTGGTCATG
CCGGTTTTGT GGCGGCGTGC CAAGGAGCAT GGCTATGTGA CCGCAGGCGA TGTGGTGCAT
GGCCAATATG GCTCTCGTGC TTTGGAGCTG GTGGTAGCGC TGACAGGGGT GATTGCCACA
ATGCCCTATA TCGCCCTTCA GTTGGTCGGC ATGGCCGCCG TGCTGAAGGC GCTTGGCCTG
CATGGCGAAG TGCCGCTGAT GGTGTCCTTC ATCATTCTGG CGCTCTACAC CTATTCCGCA
GGCTTGCGAG CTCCGGCGCT GATCGCTTTC GTCAAGGACA TCATGATCTA TATCGTGGTG
ATTGTTGCCG TCGCCGCGAT CCCGATGAAG CTTGGCGGTT ATGCCAACGT GTTTGCCAGT
GCCGATGCGG CCTTCCAGGC CAAGGGTTCC GGCGGGCTGT TGCTGGGTGG TAATCAATAT
GTGGCCTATG CGACGCTGGC CTTCGGTTCG GCGCTGGCGG CTTTCATGTA TCCGCACACG
TTGACGGGCA TTTTTGCCTC GAACGGTGCC AATACCATCC GCAAGAACGC CATGCTGCTG
CCCGCCTATA CGCTGCTCTT GGGGCTTTTG GCGCTGCTGG GCTATATGGG CCATGCCGCA
GGCCTGAAAC CGGCCACCCC GAATGACATT GTGCCGATGC TGTTCCAGAC GCTGTTTCCA
AGCTGGTTTG CGGGCTTTGC CTTTGCTGCC ATCGCCATTG GTGCTCTGGT GCCAGCCGCG
GTGATGAGCA TTGGTGCCGC CAATCTATTC ACCCGCAATT TCTGGAAGGC CTATGTCAAC
CCGGATGTGT CGCATGCAGG TGAAGCGCAG GTAGCAAAAA TCACCTCCCT GGTGGTCAAG
GTCGGGGCGC TGCTGGTGAT TGTCTTCCTG CCGACCCAGT TTGCGCTGGA TCTTCAGCTT
TTGGGTGGCG TCTGGATCTT GCAGACCTTG CCAGCGTTGA TCTTCGGCCT GTTTTCCAAC
TGGTTCCGGG TTCCCGGCCT GCTGGCGGGC TGGGTAGTCG GCTTTGTCGG CGGCACCTGG
CTGGTCTGGC TGAATGGCTT GAAGCCGCTG CATACGCTGA GCTTCGGGGA CACGCATTTC
ACCGTCTATA CCGGCATTCT GGCACTCGTG GCCAATATTG TTGTGGCGGT GGTGGTCAAC
CTGATCACCC CAGCCAAGGT AACGGCGCGG GCGTGA
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| Protein sequence | MMTEIDPTAL AVFIFFFALV TVMGFVASRW RKPETMAHID EWGLGGRKFG TWITWFLVGG
DFYTAYTVIA VPALVYAVGA YGFFALPYTI IVYPFVFLVM PVLWRRAKEH GYVTAGDVVH
GQYGSRALEL VVALTGVIAT MPYIALQLVG MAAVLKALGL HGEVPLMVSF IILALYTYSA
GLRAPALIAF VKDIMIYIVV IVAVAAIPMK LGGYANVFAS ADAAFQAKGS GGLLLGGNQY
VAYATLAFGS ALAAFMYPHT LTGIFASNGA NTIRKNAMLL PAYTLLLGLL ALLGYMGHAA
GLKPATPNDI VPMLFQTLFP SWFAGFAFAA IAIGALVPAA VMSIGAANLF TRNFWKAYVN
PDVSHAGEAQ VAKITSLVVK VGALLVIVFL PTQFALDLQL LGGVWILQTL PALIFGLFSN
WFRVPGLLAG WVVGFVGGTW LVWLNGLKPL HTLSFGDTHF TVYTGILALV ANIVVAVVVN
LITPAKVTAR A
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