| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5815 |
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| Symbol | |
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| ID | 7380602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 836406 |
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| End bp | 837431 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649352 |
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| Product | quinone oxidoreductase |
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| Protein accession | YP_002547589 |
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| Protein GI | 222106798 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.369115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATC AACAGAACCT CCAAATTCAG CTTGCATCCC GTCCAACTGG CGCTCCAGCC
GCCGATAATT TTCGGCTGGA GACAGGGTCT GTGGGCGAGC CCGCCGACGG CGAGGTTCTG
CTGCAAATCC TCTATCTGTC TCTCGATCCC TATATGCGCG GACGCATGAG CGCTGCGAAA
TCCTATGCCA AGCCGGTTGA GATTGGCGCT GTGATGGAGG GCGGTACAGT TGCCCGCGTG
ATCCGCTCAA GACACAATGA TTTTCAAGAG GGCGACATCG TTCTCTCCCA TTCCGGCTGG
CAAAGTTATG CGATAGCCAA GGGAGAGACG CTACGCAAGA TCGATCCGTC GGCAGCCCCC
GTTAGTACCG CGCTCGGCGT GCTGGGCATG CCGGGATTTA CCGCCTATGC GGGATTGCTG
ACCATTGGCA AGCCAAAGCC CGGCGAAACG GTCGTGGTGG CCGCGGCCAG CGGCGCGGTT
GGCTCTGCGG TCGGTCAGAT TGCCCGCCTC AAAGGTGCGC GCGCGGTCGG CATTGCCGGC
GGGGCTGACA AATGCGCTTT TATCAAAAAC GAACTCGGTT TCGATGCGGT GGTCGATCAC
CGCTCTCCTG ACTTTGCCCA GGAGCTGGCC CAGGCCTGCC CTGATGGCAT AGACGTTTAT
TTCGAAAATG TCGGTGGTGA TGTCTGGAAA GCGGTCTTCC CGCTGCTCAA TAGCTTTGCG
CGTGTGCCGG TCTGCGGGCT GATTGCCCAG TATAACCAGT CCGTGGAGGA TGCGCCCGGC
CGGGACCGTC TGCCGATGAC CATGCGCGAT ATTCTGACCA AGAGCCTGAC CGTGCGGGGC
TTTATCCAAC GCGAATTTGT TGATCAGTTT CCGCAATTCC AGCGGGAGGC GGCAGGCTGG
ATTGCCGATG GATCGCTGCG CTACCGGGAA GACATTGTCG ATGGGTTGGA AAACGCCCCT
CAAGCCTTTA TCGGTCTGTT GGAGGGCAAG AATTTCGGCA AATTGCTGGT GCGCGTTTCA
CAGTAA
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| Protein sequence | MTHQQNLQIQ LASRPTGAPA ADNFRLETGS VGEPADGEVL LQILYLSLDP YMRGRMSAAK
SYAKPVEIGA VMEGGTVARV IRSRHNDFQE GDIVLSHSGW QSYAIAKGET LRKIDPSAAP
VSTALGVLGM PGFTAYAGLL TIGKPKPGET VVVAAASGAV GSAVGQIARL KGARAVGIAG
GADKCAFIKN ELGFDAVVDH RSPDFAQELA QACPDGIDVY FENVGGDVWK AVFPLLNSFA
RVPVCGLIAQ YNQSVEDAPG RDRLPMTMRD ILTKSLTVRG FIQREFVDQF PQFQREAAGW
IADGSLRYRE DIVDGLENAP QAFIGLLEGK NFGKLLVRVS Q
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