Gene Avi_5811 details

Gene Information

• Locus tag: Avi_5811
• ID: 7380598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 831072
• End bp: 831743
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643649348
• Product: hypothetical protein
• Protein accession: YP_002547585
• Protein GI: 222106794
• COG category: [S] Function unknown
• COG ID: [COG1376] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGCAT TGATGATGGC AGCACTGGCC TTGCCAGCGT CAGGCTCGGC AGCAGCACCG 
AGAGCGGACG ATCCGGCCAA CTCGACGGCC AGCAGCGTTG TAACGCCGCA GATGATGAAG 
CGGGAGGTTC CCGATAAATT CAAGCGGCGG CTGGTGCGGC TCAAAACCGA TGAGGCGCCA 
GGTACTGTTA TCATCGATAC CAACAATAAG TTCCTCTATC TCGTCGAGGG CAATAACCGG 
GCGATCCGCT ACGGCGTCGG CGTCGGGCGT GAGGGTTTCG GTTGGTCGGG TGTCGTCAAT 
ATCGGTCGCA AGGTGGAATG GCCAAGCTGG CGTCCGCCGG AAGAAATGCG TGTGCGTGAA 
GCGCGTCGCG GTCATATCCT CCCCGTCGTG CAGGAAGGAG GACCGGATAA TCCGCTCGGT 
GCGCGCGCCA TGTATCTCTA CAAGGGCAAT CGCGATACGA TTTTCCGCAT TCATGGCACC 
AATCAGCCAT GGTCCATCGG GCTGAACCTG TCCTCGGGTT GCATCCGTAT GAACAACAAG 
GATGTCGAGG ATCTCTATGC CCGCGCCGAA ATCGGTAGCA AGGTTATCGT GGTCGGTCCC 
GGCAATAAGC AGGGCGAAGT GAGTTTCGAT GACCGTGGTA TCGACCTACT GCGGACGATC 
TTCGGCGGCT GA 

 

Protein sequence

MAALMMAALA LPASGSAAAP RADDPANSTA SSVVTPQMMK REVPDKFKRR LVRLKTDEAP 
GTVIIDTNNK FLYLVEGNNR AIRYGVGVGR EGFGWSGVVN IGRKVEWPSW RPPEEMRVRE 
ARRGHILPVV QEGGPDNPLG ARAMYLYKGN RDTIFRIHGT NQPWSIGLNL SSGCIRMNNK 
DVEDLYARAE IGSKVIVVGP GNKQGEVSFD DRGIDLLRTI FGG