Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5793 |
Symbol | |
ID | 7380585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 817432 |
End bp | 817878 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649335 |
Product | hypothetical protein |
Protein accession | YP_002547572 |
Protein GI | 222106781 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA CCAATAACGC GATCCTTCTG CTCGCCAGAA TTCTTCTCTC CTTCATCTTC ATTCTGTCTG GCTTTGGCAA ACTGACCGAT CCGGCTTCCA CGGCCGGCAT GATCACGGGC GCTGGACTGC CTGCTGCGAC GGCTCTGGCC TATCTGGCTG GTGCGTTTGA GTTGATCACC GGTCTTTCAG TTCTCGTTGG CTTTCAGACG AAGATCGTCG GCTGGGCCTT GGCGTTGTTT TGCATCTTCA CCGGCGCTGT CTTCCATAGC GGCACGGTTG CCGTTCCCGG CTGGCCGGAT GCAGCACTCG GCTGGATCAA CACGCTGAAC GGCATCATGA TGATGAAGAA CTTCACCCTT GCTGGCGCTT ATATCCTGCT GGCAACGGTT GGAGCAGGCG CCTACTCGCT CGACGCCCGT CGCGGTGGTA AGCTGGCTCT TGCCTGA
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Protein sequence | MSNTNNAILL LARILLSFIF ILSGFGKLTD PASTAGMITG AGLPAATALA YLAGAFELIT GLSVLVGFQT KIVGWALALF CIFTGAVFHS GTVAVPGWPD AALGWINTLN GIMMMKNFTL AGAYILLATV GAGAYSLDAR RGGKLALA
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