Gene Avi_5793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5793 
Symbol 
ID7380585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp817432 
End bp817878 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID643649335 
Producthypothetical protein 
Protein accessionYP_002547572 
Protein GI222106781 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATA CCAATAACGC GATCCTTCTG CTCGCCAGAA TTCTTCTCTC CTTCATCTTC 
ATTCTGTCTG GCTTTGGCAA ACTGACCGAT CCGGCTTCCA CGGCCGGCAT GATCACGGGC
GCTGGACTGC CTGCTGCGAC GGCTCTGGCC TATCTGGCTG GTGCGTTTGA GTTGATCACC
GGTCTTTCAG TTCTCGTTGG CTTTCAGACG AAGATCGTCG GCTGGGCCTT GGCGTTGTTT
TGCATCTTCA CCGGCGCTGT CTTCCATAGC GGCACGGTTG CCGTTCCCGG CTGGCCGGAT
GCAGCACTCG GCTGGATCAA CACGCTGAAC GGCATCATGA TGATGAAGAA CTTCACCCTT
GCTGGCGCTT ATATCCTGCT GGCAACGGTT GGAGCAGGCG CCTACTCGCT CGACGCCCGT
CGCGGTGGTA AGCTGGCTCT TGCCTGA
 
Protein sequence
MSNTNNAILL LARILLSFIF ILSGFGKLTD PASTAGMITG AGLPAATALA YLAGAFELIT 
GLSVLVGFQT KIVGWALALF CIFTGAVFHS GTVAVPGWPD AALGWINTLN GIMMMKNFTL
AGAYILLATV GAGAYSLDAR RGGKLALA