| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5789 |
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| Symbol | glcF |
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| ID | 7380582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 814683 |
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| End bp | 815978 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649332 |
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| Product | glycolate oxidase iron-sulfur subunit |
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| Protein accession | YP_002547569 |
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| Protein GI | 222106778 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGCCCAAC TTGCCGATCC AAAAACCGCT GAAGCCGAGA GAATCCTGCG CCGTTGCGTG
CATTGCGGCT TCTGCACCGC GACCTGTCCC ACCTATGTCA CGCTTGGCAA TGAGTTGGAC
AGTCCGCGCG GGCGCATCTA TCTGATCAAG GATATGCTGG AAAACGGGCG GGCGGCGGAT
GAGGAAATCG TCACGCATAT CGACCGATGT CTGTCCTGTC TGGCCTGTAC GACGACCTGT
CCCTCCGGTG TCGATTATAT GCATCTGGTC GACCATGCGC GCAACCATAT CGAAAATACC
TATAAGAGGC CGCTTGCCGA CCGGTTGATC CGTAAGCTGC TGGCGGCGGT GCTGCCTTAT
CCGGGGCGCA TGCGGGTGGC GCTGGCCTTT GCCCGGCTCG GACGCCCCTT TGCGCCACTG
ATGGAGCGTG TTGCCGCCTT GAAGCCTATG GCGGCGATGT TGCGACTGGC GCCTCAGGAT
GTGCCTTATC CATCGCCTGT GTCGCGTCCG GGTTTGCATT CGGCGCGGGG CAATCGCAAA
GGCCGGGTGG CGCTTCTGAC CGGCTGTGCC CAATCGGTGC TTGATCCCGG TATCAATGAC
GCGACCGTTG CGCTCCTGAC CCGGCTGGGT ATCGAGGTCG TCGTTCCCAA GGGGGAGGGC
TGCTGCGGGG CGCTGGTGCA TCACATGGGG CGTGAGACGG ATGCGCTTGC CGCGGCCCGG
CGTAATATTG ATGCCTGGAT GGCTGAGATC GGCTCGGGTG AGACAAGCGG CCTGGATGCC
ATCGTTATCA CCACATCCGG TTGCGGCACG ACCATCAAGG ATTACGGCCA TATGCTGCGC
CATGACCCGG TCTATAGCGC CAAGGCCGCA CGGGTTTCTG CGTTGGCCAA GGACGTGAGC
GAGTACCTCG CCAGTCTGGA TCTGCCGCAG CAGGCGGATA AGGGCGTGAC CGTTGCCTAT
CATTCCGCCT GTTCGCTGCA ACACGGCCAG AAGATAACGG CCCTGCCGAA ATTACTGTTG
AAAACGGCAG GGTTTACGGT GCGTGATCCG GCGGAAGGGC ATTTATGCTG CGGCTCGGCT
GGAACCTATA ATATTCTCCA GCCGGACATT TCGCAGCAAT TGAAAGCCCG CAAGCTGCGC
AACATCCAGG CGGTCAATCC GGATGTCGTC GCTGCTGGTA ATATTGGTTG TATGACCCAG
ATCGGTTCGG GAACCGACAT CCCTGTCGTC CACACTGTCG AATTGCTCAA CTGGGCGTTT
GGCGGAGAAA AACCCCAGAA ATTAAAGGAT TTATAA
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| Protein sequence | MAQLADPKTA EAERILRRCV HCGFCTATCP TYVTLGNELD SPRGRIYLIK DMLENGRAAD
EEIVTHIDRC LSCLACTTTC PSGVDYMHLV DHARNHIENT YKRPLADRLI RKLLAAVLPY
PGRMRVALAF ARLGRPFAPL MERVAALKPM AAMLRLAPQD VPYPSPVSRP GLHSARGNRK
GRVALLTGCA QSVLDPGIND ATVALLTRLG IEVVVPKGEG CCGALVHHMG RETDALAAAR
RNIDAWMAEI GSGETSGLDA IVITTSGCGT TIKDYGHMLR HDPVYSAKAA RVSALAKDVS
EYLASLDLPQ QADKGVTVAY HSACSLQHGQ KITALPKLLL KTAGFTVRDP AEGHLCCGSA
GTYNILQPDI SQQLKARKLR NIQAVNPDVV AAGNIGCMTQ IGSGTDIPVV HTVELLNWAF
GGEKPQKLKD L
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