| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5766 |
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| Symbol | |
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| ID | 7381644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 795318 |
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| End bp | 796454 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649316 |
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| Product | Patatin-like phospholipase domain-containing protein |
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| Protein accession | YP_002547553 |
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| Protein GI | 222106762 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCGT CCGAGACCAA TGCCGCCACT GATCGTATTT TTGTCTTTCA GGGTGGGGGG
GCTTTGGGTG CTTATCAGGC CGGTGCTTAT GAGGCTCTTC ACGCCCATGA TGTCGATCCG
GATTGGCTGG CCGGTATTTC CATCGGATCG ATCAACTCGG CGCTGATTGC TGGCAGCCCC
AGGGAAAAAC GGGTGGAAAA CCTGCGCGCC TTCTGGGACA TGGTGTCTTC ACAGCTGAAT
TTCAACCTTG GCGATCAAGA CACCGCGTCG CGGCGCACCA CCAACGATCT CTCGGCGCTG
ACCGGCATGA TGTTTGGCAT TCCCGGCTTC TTTTCACCGC GTCTGCCCAC CCCGCAGCAA
GTGTTGCTCA ATCCTGATTA CCGCGTCAGC GTTTATGACA CCGAACCGCT GATCAAGACG
CTGAACAATC TGATCGATTT CAAATTGCTG AATGACGGCA CGACACGTCT CAGCCTCGGC
GCTGTGGACG TTCTCTCCGG CAATTTCGCC TATTTCGACA ATCGTCACAC CAGGCTCGAT
GCCCGCCATA TCGCTGCTTC CGGCGCGCTG CCGCCCGGTT TCCCACCGGT TGAAATTGAT
GGCCGGTTTT ATTGGGATGG TGGATTGGTC TCGAACACAC CCTTGCAGCA TGTGCTGGAA
ACCAATGAAA GCCAGAGAGA TCTGGACATT TTCCAGGTCG ATCTGTTCAG CGCGCGCGGC
GACATGCCAA AGGACCAGTT CGAGGTGGAA AGCCGCACCA AGGAGATTCG GTTTTCCAGC
CGAACCCGTA TGAATACCGA TGAATTCGCC CGCAAACAGG TGATCCGCCG CACCGCCAAA
CGCCTGCTGG ACAAGCTGCC ACCGGAATTT CGCGATGACG AGGATGCCAA GCTGCTGCGC
TCCATTGGCC AGGAATATGA CGTCACCATC GTCCACCTCA TTCACCGGCG CGCCGCCCAC
GCCACCCATT CGATGGACTA TGAATTTTCG CGCGCCTCCA TCAACGAACA TTGGCAGGCT
GGATACGACG ACGCCACCTA CACGCTGAAA CATCCGAAAT GGCGCAACCG CGGCCGCCCA
AGGGATGGCA TTCAGATCTT CGATTTGAGC CGCGAACGTC GTCGTATCGG GTCGTGA
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| Protein sequence | MLSSETNAAT DRIFVFQGGG ALGAYQAGAY EALHAHDVDP DWLAGISIGS INSALIAGSP
REKRVENLRA FWDMVSSQLN FNLGDQDTAS RRTTNDLSAL TGMMFGIPGF FSPRLPTPQQ
VLLNPDYRVS VYDTEPLIKT LNNLIDFKLL NDGTTRLSLG AVDVLSGNFA YFDNRHTRLD
ARHIAASGAL PPGFPPVEID GRFYWDGGLV SNTPLQHVLE TNESQRDLDI FQVDLFSARG
DMPKDQFEVE SRTKEIRFSS RTRMNTDEFA RKQVIRRTAK RLLDKLPPEF RDDEDAKLLR
SIGQEYDVTI VHLIHRRAAH ATHSMDYEFS RASINEHWQA GYDDATYTLK HPKWRNRGRP
RDGIQIFDLS RERRRIGS
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