| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5754 |
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| Symbol | lldA |
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| ID | 7381635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 783302 |
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| End bp | 784462 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649307 |
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| Product | L-lactate dehydrogenase |
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| Protein accession | YP_002547544 |
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| Protein GI | 222106753 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.202266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATTG CATTGACAAT CGATGACCTG AAACGTCAAG CAAAGCGCCG TGTCCCGAAA
ATGTTCTTCG ACTATGCCGA TAGTGGATCC TTGAGCGAGA GCACTTACCA CGCCAACGAG
AGTGATTTTT CCCGCATCAA GCTGCGTCAG CGGGTTCTGG TCGATATGAC AGAACGGTCG
CTGGCAAGCA CGATGATCGG AGAGCCTGTG ACCATGCCGG TGGCGCTCGC CCCGACCGGA
ATGACCGGCA TGCAGCATGC CGATGGGGAA ATTCTCGCGG CGGAAGCAGC TGAAGCTTAC
GGCGTGCCCT TCACGCTGTC CACCATGAGC ATCTGCTCGA TTGAAGATGT CGCGCTTCAT
ACGCGCCGCC CCTTCTGGTT CCAGCTTTAC GTCATGAAGG ACCGCGATTT CGTCAACAGC
CTGATCGACC GTGCCAAGGC TGCCCATTGC TCAGCACTGG TGTTGACGCT CGATCTGCAA
ATCCTTGGAC AGCGCCACAA GGACCTGCGC AACGGCCTGT CGGCGCCGCC AAAATTCACC
CCGAAACATC TCTGGCAGAT GGCGACCAAG CCACAATGGT GCATCGGCAT GGCCAATACG
CGGCGGCGTC ATTTCGGCAA TATCGTCGGC CATGCCAAGA ACGTCTCCAG CCTGTCTTCG
CTCTCGGCCT GGACGGCGGA ACAGTTCGAT CCGAAACTGT CGTGGAGCGA TGTTGCCTGG
ATCAAGGAGC GCTGGGGTGG CAAATTGATC CTGAAGGGCA TTCTCGATGT GGAGGACGCC
CGCGCCGCCG CCGATAGCGG GGCGGATGCG ATTATCGTGT CCAACCATGG CGGTCGCCAA
CTGGATGGCG CGCCGTCGTC CATCTCCATG CTGGCCTCGA TTGTCGAGGC GGTGGGAGAC
CGGATCGAAG TGCATATCGA TGGCGGTATC CGCTCGGGTC AGGACGTGTT GAAGGCCCTG
GCCTTGGGTG CCAAGGGGAC CTATATCGGC CGACCGTTTC TCTACGGGCT TGGCGCGGAT
GGGCGAGCTG GTGTGCAGCG CGCATTGGAG ATCATCGCCA GGGAGCTTGA TATCAGCATG
GCACTGTGCG GCAAGCGGCT GATTTCGGAG GTGAACGCCT CGATCCTGAT GGGCAATCCC
TTCGCTGCGG GACCTTGCTG A
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| Protein sequence | MPIALTIDDL KRQAKRRVPK MFFDYADSGS LSESTYHANE SDFSRIKLRQ RVLVDMTERS
LASTMIGEPV TMPVALAPTG MTGMQHADGE ILAAEAAEAY GVPFTLSTMS ICSIEDVALH
TRRPFWFQLY VMKDRDFVNS LIDRAKAAHC SALVLTLDLQ ILGQRHKDLR NGLSAPPKFT
PKHLWQMATK PQWCIGMANT RRRHFGNIVG HAKNVSSLSS LSAWTAEQFD PKLSWSDVAW
IKERWGGKLI LKGILDVEDA RAAADSGADA IIVSNHGGRQ LDGAPSSISM LASIVEAVGD
RIEVHIDGGI RSGQDVLKAL ALGAKGTYIG RPFLYGLGAD GRAGVQRALE IIARELDISM
ALCGKRLISE VNASILMGNP FAAGPC
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