| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5747 |
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| Symbol | glxA |
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| ID | 7381628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 775665 |
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| End bp | 776618 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649300 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002547537 |
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| Protein GI | 222106746 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.807364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA ACTCCAGCAC CCAGACCTAT GGCTTCGTCC TGACGCCGAA TTTTGCGCTG
ATGTCCTTCT CATCCGCCAC CGAGCCGCTG CGCGCCGCCA ATCTGTTGGC GCAAACACCG
CTTTATGCCA TCAGGCCGCT TTCCCTCCGA GGACAAGCGG TGCGCTGTTC GGCAGGCTTT
GATATTACCT GCGGTGATCT GGCCGCAGAA GGCCCGGCCT GCCACACGCT GTTTGTGGTA
GCGGGCGGCA ATCCGATAGA CTGGATTCAT ACCAGTGACA TGCACGCAAC TTTGCGCAAA
CTCTCCCGAC AAGGGGTGCG CATTGGCGGC ATTTCCAGCG GGGCCTATGT TTTGGCGCAA
GCGGGCCTGT TGCAGGAGCG GGATTTTACC ATTCATTGGG AACACGCTCC TGCCCTTCGG
GAAGCCTTTC CCGACCTTGC CCCGCGCCAA GCCCGCTACG TGCTGGATGG TGATCGGCTG
ACCTGCGGCG GTGGCGTTGC CCCTCTCGAT ATGATGCATG CTTTGATTGG CGAGCGGATG
GGGCCGGAAT TTGCCCGCCG AGTCAGCGAT TGGTATCTGC ACACGGCCGT CACAGAAGCG
AGCGCGCCGC AGCGCGGCTC ATCGGTGGAG CGTTTTGGCA CCCATCACCC GGCACTGGTG
ACGGCATTGG AAAAAATGGA AGCCACATTG GAAAATCCGC TGGATCGGCA GACGATTGCG
CGGCTAGTGG GCATTACGCC CCGGCATCTG GATCGGCTGT TCGCTAGCCA TATGGAGGCG
AGTTTTCACG ACACCTATCG CCACATGCGG CTTGCCCATG CGCGCAAACT TTTGGAGCAA
AGTCCGCTGT CGCTGTCAGA AATTGCCTTT GCCACCGGCT TTTCCAGCGC CTCGCATTTT
TCACGGGCGT TCAAACAGCA GTTTGGCATT CAGCCAAAAT CGGTTAGATC GTAA
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| Protein sequence | MSENSSTQTY GFVLTPNFAL MSFSSATEPL RAANLLAQTP LYAIRPLSLR GQAVRCSAGF
DITCGDLAAE GPACHTLFVV AGGNPIDWIH TSDMHATLRK LSRQGVRIGG ISSGAYVLAQ
AGLLQERDFT IHWEHAPALR EAFPDLAPRQ ARYVLDGDRL TCGGGVAPLD MMHALIGERM
GPEFARRVSD WYLHTAVTEA SAPQRGSSVE RFGTHHPALV TALEKMEATL ENPLDRQTIA
RLVGITPRHL DRLFASHMEA SFHDTYRHMR LAHARKLLEQ SPLSLSEIAF ATGFSSASHF
SRAFKQQFGI QPKSVRS
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