| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5742 |
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| Symbol | |
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| ID | 7381623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 768427 |
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| End bp | 770355 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649295 |
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| Product | beta-galactosidase |
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| Protein accession | YP_002547532 |
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| Protein GI | 222106741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.585873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCG TTTGCTATTA TCCCGAACAT TGGCCGGAGA GCCAATGGCA TATCGATGCG
CAAAACATGC GCAAGCTTGG CATTTCCTAT GTGCGCATCG GCGAATTCGC CTGGTCGCGG
CTGGAGGCGA GGCGGGGTCA GTTCACCTTC GAATGGCTGG ACCGGGCCAT CGATATTCTG
CATGAGGCGG GCCTGAAGGT GGTGCTTGGC ACCCCGACCG CCACACCGCC GAAATGGCTG
ATGGACGAGC ATCCCGACAT TGCGCCCTAT GATGCCGACG GGAATGTGCG CGGCTTCGGC
TCGCGTCGCC ATTATAGTTT TTCGAGCGAA ATCTGGTGGG CCGAAAGCGC TCGAATCGTT
GAAGTCATCG CCAAGCGCTA CGGCACCCAT CCGGGCATTG CTGGCTGGCA GACCGATAAC
GAATACGGCT GCCATGACAC CACCGTATCT TGGGGGCCTG AAGACCTGAA GGCCTTCCGC
CGCTGGTTGC GGATGCGGTA TCAGACCACC GACCAGCTCA ATGAGGCCTG GGGCTCGGTG
TTCTGGTCGA TGGAGGTCAA CAGTTTTGAT GAGGTCGAGC TACCCACCCG CACCGTGACC
GAGCCGAACC CGGCGCAGCG GCTGGATTTC TGGCGCTTCT CCTCCGATCA GGTGGCCGCC
TATGATAAAA TGCAGGTGGA CATCATCCGC AAGCATTCAC CGGGCCGCTG GATTACCCAT
AACTTCATGG GTTTCATCAA TGATTTCGAT CATTTCCAGG TGGGCGACAA TCTCGATCTC
GCCAGCTGGG ATAGCTATCC GATCGGCTTC GTCGAAAAAT TCCCGTTTAC CGAAGACGAG
CGCAATCGTT GGGCGGAAAC CTCCCATCCC GACATCGCGC CCTTCCACCA TGATCTCTAC
CGCGGTGTTG GCCGTGGCCG GTTCTGGGTG ATGGAGCAGC AGCCCGGTCC GGTCAATTGG
GCACCGTGGA ACCCGGTTCC CAAGCCCGGC ATGGTCAGGC TGTGGACCTG GGAAGCGCTG
GCGCATGGGG CAGAGGTGGT CAGCTATTTC CGCTGGCGCC AGGCACCGTT TGCGCAGGAG
CAGATGCATG CAGGCCTCAA TCTGCCGGGG CTTGATGAAT GGTCGGTGGG CGGGTTGGAA
GCGCATGCCG TTGCTGGCGA ACTGGCAGCG CTTGGCGATC TGCCAGAGAG CGTTCAGGCA
CCCGTGGCGC TGGTCTATGA CTATGCCAGC TATTGGGCGA CAACCATCCA GCCGCAGGGC
CGGGATTTCC GCTACGAGGA ATTGGCGTTT CGCTGGTACG AAGCAGCCCG CCGCCTGGGG
CTGGACGTGG ATTTTGTGCG CCCCGGTGCT GATCTGTCCG GTTATAAACT GGTGCTCGTT
CCCTGCCTGA TGCAGGTGAA CGAGGCGGCG CTTGCGGCCT TTAAAAACAC CGATGCCGTC
GTGCTGTACG GTCCGCGCAC CGGTTCACGC GACGAGAAAT TCCGTATTCC GGAAAACCTG
CCGCCCGGTC CGCTGGCTCC TTTGACCGAT ACGCGCCAAA CGCAAGTCGC CTCACTGCGG
CCCCGTCTTG GTGATAGCGT TTCAGGCTCA GTTTCGGGCC GGGCCATCCG CTGGCGGGAA
TATCTGGAAA CCACGGCAAC CGTCATCGCC ACATTCGAAA ACGGCGATCC GGCCCTGACG
AGCCAGAACG ACCACCATTA TCTGGCCTGC TGGCCCGACG AGGCTTTGCT GTCTTCAACG
CTGGCGGTGC TGGCGGAAAA GGCTGGTCTC GAAACCCTTG TTTTACCAGA GCATATCCGC
ATCCGCCGCC GTGGCAACCT CACATTCGCC TTCAATTATG GGGCTGAGGA CTGGACCATT
CCGGTATCCG GCGAGTTTGT CTTAGGCGGA CAAGTGCTTA AGCCGCAGCA ATTGGCGGTA
TGGGTTTGA
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| Protein sequence | MLGVCYYPEH WPESQWHIDA QNMRKLGISY VRIGEFAWSR LEARRGQFTF EWLDRAIDIL
HEAGLKVVLG TPTATPPKWL MDEHPDIAPY DADGNVRGFG SRRHYSFSSE IWWAESARIV
EVIAKRYGTH PGIAGWQTDN EYGCHDTTVS WGPEDLKAFR RWLRMRYQTT DQLNEAWGSV
FWSMEVNSFD EVELPTRTVT EPNPAQRLDF WRFSSDQVAA YDKMQVDIIR KHSPGRWITH
NFMGFINDFD HFQVGDNLDL ASWDSYPIGF VEKFPFTEDE RNRWAETSHP DIAPFHHDLY
RGVGRGRFWV MEQQPGPVNW APWNPVPKPG MVRLWTWEAL AHGAEVVSYF RWRQAPFAQE
QMHAGLNLPG LDEWSVGGLE AHAVAGELAA LGDLPESVQA PVALVYDYAS YWATTIQPQG
RDFRYEELAF RWYEAARRLG LDVDFVRPGA DLSGYKLVLV PCLMQVNEAA LAAFKNTDAV
VLYGPRTGSR DEKFRIPENL PPGPLAPLTD TRQTQVASLR PRLGDSVSGS VSGRAIRWRE
YLETTATVIA TFENGDPALT SQNDHHYLAC WPDEALLSST LAVLAEKAGL ETLVLPEHIR
IRRRGNLTFA FNYGAEDWTI PVSGEFVLGG QVLKPQQLAV WV
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