| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5707 |
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| Symbol | |
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| ID | 7381593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 731250 |
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| End bp | 732773 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649265 |
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| Product | alpha-L-arabinofuranosidase |
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| Protein accession | YP_002547502 |
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| Protein GI | 222106711 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.190024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGA CCGTTCTGGC GCATGCCGAT TTCAGCATTG CGGAGATTGA TCCACGGCTC
TACGGCTCCT TCATAGAGCA TCTGGGCCGG GCGGTTTACA CCGGTATTTA TGAACCCGAT
CACCCAAGCG CCGATGAAAA CGGCATGCGC CGCGATGTCA TCGATCTGGT GCGGGAGTTG
AACGTGCCGA TTGTCCGTTA TCCCGGCGGC AATTTCGTTT CGGCCTATAA TTGGGAAGAC
GGCATTGGCC CCAAAAATCA GCGCCCGGTT CGGCTTGATC TCGCCTGGCA TACCTCCGAG
AGCAATGAGG TTGGCCTTCA CGAGTTTGCC GATTGGTGCA CCTCTGTCGG CACGGAGATG
ATGCTGGCCG TCAATCTCGG GTCGCGCGGG CTGGATGAGG CGCGCAATTT TCTGGAATAT
GCCAATCATT CCGGCGGCAG CTATTGGAGC GATCTGCGCA TCAGCAATGG CAGGCCCCAG
CCTTTCGATG TGAAGCTCTG GTGCCTGGGC AATGAAATGG ACGGCCCTTG GCAGATCGGC
CACAAATCCG CGGATGAATA TGGCCGGCTT GCCCACGAGA CAGCGAAGGC CATGCGGACC
TTCGATAAAT CGCTGGAACT GGTGGTCTGC GGTTCGTCCA ATGCCAAGAT GCCGAGCTAT
CCGCAATGGG AAGCGACCGT TCTCGACCAT ACCTATAATG AGGTCGATTA TATTTCCCTG
CATATGTATT TTGACAACAA GGCAGGCGAT ACGCCCAATT ATCTCGCCCA GAACAAGAAG
CTGGATGATT ATATCGTCTC GGTATCGGGC GTGATTGATT TCATCAAGGC CAAGAAACGC
TCTTCCAAGA ATGTCTATAT TTCCTTTGAT GAATGGAATG TCTGGTATCA TTCCAACGAA
CAGGACAAGG CAATCCTCCA GGGCAATGAC GGTTGGCCCT TCGCGCCGCC ATTGTTGGAA
GACATCTATA ATTTCGAGGA TGTGTTGCAG GTCGGGCTGA TTATCAACAC TTTCATCCGC
CGTTCCAACG TGGTGCGCAT CGCCTGCCTG GCGCAATTGG TCAATGTGAT CGCGCCAATC
ATGACGGCGC CGGGCGGTCC AGCCTGGCGG CAGACGATTT TCTATCCGTT CCTGTTCGCC
TCGGTGCATG GCCGTGGCAC GGCGCTGGAT CTCAGGGTGA AAAGCCCGAC CTATACGGCG
TCTGCCGTCG GTGAGGTCGA CAGTCTCGAC ATTGCCGCCG TGCATGACAC GGCGGATGGC
TCGATTGCTT TCTTCGTCGT CAATCGTTCA GAGGCGGCCA TCGAGACCAC ATTCGATTTG
CAGGGGTTTG GCACCGCGCC ATCTATCGCC GATTATCAGG TGATGACCCA TGCCGATTTG
AAGGCGGTCA ATACGCAGGA GCGGATGACG GAGGTTGCGC CACGCCCCGG CGAGGGGCTG
GTTATCGACG GCACAAGCCT GACGACGTCG TTTCCGGCGC TGTCCTACCA GATGATCCGG
GTGAAGGTTC GGGATGTCTC CTAG
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| Protein sequence | MKATVLAHAD FSIAEIDPRL YGSFIEHLGR AVYTGIYEPD HPSADENGMR RDVIDLVREL
NVPIVRYPGG NFVSAYNWED GIGPKNQRPV RLDLAWHTSE SNEVGLHEFA DWCTSVGTEM
MLAVNLGSRG LDEARNFLEY ANHSGGSYWS DLRISNGRPQ PFDVKLWCLG NEMDGPWQIG
HKSADEYGRL AHETAKAMRT FDKSLELVVC GSSNAKMPSY PQWEATVLDH TYNEVDYISL
HMYFDNKAGD TPNYLAQNKK LDDYIVSVSG VIDFIKAKKR SSKNVYISFD EWNVWYHSNE
QDKAILQGND GWPFAPPLLE DIYNFEDVLQ VGLIINTFIR RSNVVRIACL AQLVNVIAPI
MTAPGGPAWR QTIFYPFLFA SVHGRGTALD LRVKSPTYTA SAVGEVDSLD IAAVHDTADG
SIAFFVVNRS EAAIETTFDL QGFGTAPSIA DYQVMTHADL KAVNTQERMT EVAPRPGEGL
VIDGTSLTTS FPALSYQMIR VKVRDVS
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