| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5703 |
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| Symbol | |
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| ID | 7381590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 727834 |
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| End bp | 728574 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649262 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002547499 |
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| Protein GI | 222106708 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG CCCCATCGCC GAATGAAGCA CAGCGCAAGC CAAGGCTGGC CGAAAGCGTC
ATCGAAGCCT TGCGTGCCGA TATCGTCGGC GGACGGCTGG CGCTCGGCAC GCAATTGCCG
ACCGAGCCGG GGCTGATCGA GCGGTTCGGG GTCAGCCGCA CGGTGATCCG CGAGGCCTTG
GCCGAGCTAC GGGCTGCTGG CCTTGTCGAT GCCCGCCAGG GCAAGGGCGT GTTCGTTGTT
GATGACCTGC CCGGACAGGA ATTGCGCCTC AGCACGGAAG AGCAGCGGAG CATTCCTAAA
ACCCTGGAAA TGCTGGAATT CAGGGTGGCG ATCGAGACGG AAGCCGCAGC ACTTGCCGCC
GTGCGCCGCT CTTCGGCGCA GGAATATGAG ATCCGGGCGG CCAATGAGGT GATGGCGGAT
CTTGTTGCTG AAAAAGCGCC GACCTCCAAG GCGGATTTCG ATTTTCACCT GGCCATCGCC
CGGGCCACCA ATAACAGCTA TTATCTGAGC GCCTTGCAAA GCTTTGGTCC GCAGGCCATT
CCGCGCTCCA ACTTGCCCAA CCTGGCCTCT TCACGCAGCG AAACCTATCT TTCGCAAGTG
GTGGAGGAGC ATGGTCGGAT TGCCGACGCC ATTTCCGGTC AGGACCCGCA GGGTGCACGC
GCCGCGATGC GCGAGCATAT CGAGAAATCC CAGGAGCGGC ATCGGGCGCT GGCCCGGAAT
CTGCGCAAGG AGGGCGGCTG A
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| Protein sequence | MAKAPSPNEA QRKPRLAESV IEALRADIVG GRLALGTQLP TEPGLIERFG VSRTVIREAL
AELRAAGLVD ARQGKGVFVV DDLPGQELRL STEEQRSIPK TLEMLEFRVA IETEAAALAA
VRRSSAQEYE IRAANEVMAD LVAEKAPTSK ADFDFHLAIA RATNNSYYLS ALQSFGPQAI
PRSNLPNLAS SRSETYLSQV VEEHGRIADA ISGQDPQGAR AAMREHIEKS QERHRALARN
LRKEGG
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