Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5687 |
Symbol | mutA |
ID | 7381576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 709627 |
End bp | 711765 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649248 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_002547485 |
Protein GI | 222106694 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAGA AGACGGTTGC AGATTGGCAG TCGCTTGCCG AAAAGGAGCT GAAGGCCAAT CCGGACAGCC TGACCTGGCA GACGCCGGAA GGCATTGCCG TCAAGCCGCT TTATACGGCA GACGATCTTG CCGGCATGGA CCATCTCGAT AGCCTGCCGG GCTTTGCGCC CTTCACCCGT GGGCCACGCG CGACGATGTA TGCCGGGCGG CCCTGGACGA TTCGCCAATA TGCCGGGTTT TCCACGGCGG AAGCCTCCAA TGCCTTTTAC AAACGCAATC TGGCGGCTGG ACAGAAGGGG CTTTCCGTCG CCTTCGACCT TGCCACGCAT CGCGGTTATG ACAGTGACCA TTCCCGTGTT GAGGGCGATG TTGGCAAGGC GGGCGTGGCG ATTGACAGTG TCGAGGACAT GAAAATCCTG TTCGACGGCA TTCCGCTGGA TGAAATGTCG GTATCGATGA CGATGAATGG CGCGGTCATT CCGATCCTGG CGAGCTTCAT TGTGGCGGGC GAAGAACAGG GTGTGTCGCG GGATAAATTG TCGGGCACCA TTCAGAACGA TATCCTGAAG GAGTTCATGG TCCGCAACAC CTATATCTAT CCGCCCGAGC CTTCGATGCG GATTGTCGCT GATATTATCG ACTATACCGC GAGGGAGATG CCGAAGTTCA ACTCCATCTC GATCTCCGGC TATCATATGC AGGAGGCGGG CGCGACGCTG GTGCAGGAAC TTGCCTTCAC GCTTGCCGAT GGCCGTGAAT ATGTGCGGGC AGCGCTGGCC AAGGGCCTGG ATGTCGATGC CTTCGCAGGC CGGCTGTCGT TCTTCTTCGC CATTGGCATG AATTTCTTTA TGGAAGCGGC AAAACTACGG GCCGCCCGGC TGCTGTGGAC CCGGATCATG CAGGAATTTA ACCCCAAAAA GCCCGCCTCG CTGATGCTGC GCACCCATTG TCAGACGTCA GGCGTATCGC TGGCCGAGCA GGACCCGTAT AACAACATTG TCCGCACCGC TTTTGAGGCG ATGTCGGCAG TGCTGGGCGG CACGCAATCG CTGCATACCA ATTCCTTCGA TGAAGCCATA GCGCTTCCCA CCGAGTTCTC CGCGCGCATT GCCCGCAATA CCCAGCTGAT CTTGCAGCAT GAAACCGGCG TGACCAAGGT GGTCGATCCG CTGGCTGGCT CTTACTATGT CGAAAGCCTG ACCAAGGAAC TGGCGGATGC GGCCTGGGCA CTGATCGAAG AAGTGGAAAG CCTGGGTGGC ATGACCAAGG CGGTGGCTGA CGGCCTGCCC AAACGCCTGA TCGAGGAGGC CGCCACCCGC CGCCAGGCGG CTGTGGACCG CCGCGAGGAG GTGATCGTTG GCGTCAACAA ATACCGGCTG GAAACCGAAG ACGAGATCGA CATTCTCGAT ATCGACAATG CCACTGTCCG TCTTGGCCAG ATCAAGCGCC TTGAAGACAC CAAGCGCCGC CGGGATGTAA AAACGGTGGA GGCGAGCCTG GTGGAGATGA CCCGCATTGC CAAAACAGGA GAGGGCAATC TCTTGGCCGC CGCCGTTGAT GCCGCCCGCG CCCGTGCCAC CGTGGGCGAA ATATCGGATG CCATGCGGTC GGTGTTTGGC GATCACACTG CCGTGCCCAA AGTGGTATCC AAGGTCTACG GCGACCGCTA TCACGATGAT CCAGAATATC AGACGCTTGT CGGCCAGCTA TCTGACTTTG CCACAGTGCT GGGGGGCAAG CCGAAGATCA TGGTGGCCAA GCTTGGCCAG GATGGCCATG ACCGGGGTGC GAAAGTCATT TCCTCGGCGT TTGGCGATAT CGGCTTTGAT GTCATTGCCG GTCCGTTGTT CCAGACCCCG GAGGAAACCG CCGATCTGGC CGTCAGCCAC AAGGTTCAGG TCGTCGGCAT GTCCTCGCTG GCGGCTGGCC ATAAAACGCT TGCGCCACAA CTGGTTGCTG CACTCAAGGC CAAAGGCGCG GAAAACATCA TCGTCGTGGT TGGCGGTGTG ATCCCAAGAC AGGATTATCA GTTCCTCCTC GACCACGGCG TCGCAGCCGT CTTCGGACCT GGAACAAACG TGCTGGAGGC CGCAAGAGCC GTCATCAATC TTATGCAGGG TCGGTTGCGA AACCAGTAA
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Protein sequence | MSKKTVADWQ SLAEKELKAN PDSLTWQTPE GIAVKPLYTA DDLAGMDHLD SLPGFAPFTR GPRATMYAGR PWTIRQYAGF STAEASNAFY KRNLAAGQKG LSVAFDLATH RGYDSDHSRV EGDVGKAGVA IDSVEDMKIL FDGIPLDEMS VSMTMNGAVI PILASFIVAG EEQGVSRDKL SGTIQNDILK EFMVRNTYIY PPEPSMRIVA DIIDYTAREM PKFNSISISG YHMQEAGATL VQELAFTLAD GREYVRAALA KGLDVDAFAG RLSFFFAIGM NFFMEAAKLR AARLLWTRIM QEFNPKKPAS LMLRTHCQTS GVSLAEQDPY NNIVRTAFEA MSAVLGGTQS LHTNSFDEAI ALPTEFSARI ARNTQLILQH ETGVTKVVDP LAGSYYVESL TKELADAAWA LIEEVESLGG MTKAVADGLP KRLIEEAATR RQAAVDRREE VIVGVNKYRL ETEDEIDILD IDNATVRLGQ IKRLEDTKRR RDVKTVEASL VEMTRIAKTG EGNLLAAAVD AARARATVGE ISDAMRSVFG DHTAVPKVVS KVYGDRYHDD PEYQTLVGQL SDFATVLGGK PKIMVAKLGQ DGHDRGAKVI SSAFGDIGFD VIAGPLFQTP EETADLAVSH KVQVVGMSSL AAGHKTLAPQ LVAALKAKGA ENIIVVVGGV IPRQDYQFLL DHGVAAVFGP GTNVLEAARA VINLMQGRLR NQ
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