| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5687 |
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| Symbol | mutA |
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| ID | 7381576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 709627 |
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| End bp | 711765 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649248 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_002547485 |
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| Protein GI | 222106694 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGA AGACGGTTGC AGATTGGCAG TCGCTTGCCG AAAAGGAGCT GAAGGCCAAT
CCGGACAGCC TGACCTGGCA GACGCCGGAA GGCATTGCCG TCAAGCCGCT TTATACGGCA
GACGATCTTG CCGGCATGGA CCATCTCGAT AGCCTGCCGG GCTTTGCGCC CTTCACCCGT
GGGCCACGCG CGACGATGTA TGCCGGGCGG CCCTGGACGA TTCGCCAATA TGCCGGGTTT
TCCACGGCGG AAGCCTCCAA TGCCTTTTAC AAACGCAATC TGGCGGCTGG ACAGAAGGGG
CTTTCCGTCG CCTTCGACCT TGCCACGCAT CGCGGTTATG ACAGTGACCA TTCCCGTGTT
GAGGGCGATG TTGGCAAGGC GGGCGTGGCG ATTGACAGTG TCGAGGACAT GAAAATCCTG
TTCGACGGCA TTCCGCTGGA TGAAATGTCG GTATCGATGA CGATGAATGG CGCGGTCATT
CCGATCCTGG CGAGCTTCAT TGTGGCGGGC GAAGAACAGG GTGTGTCGCG GGATAAATTG
TCGGGCACCA TTCAGAACGA TATCCTGAAG GAGTTCATGG TCCGCAACAC CTATATCTAT
CCGCCCGAGC CTTCGATGCG GATTGTCGCT GATATTATCG ACTATACCGC GAGGGAGATG
CCGAAGTTCA ACTCCATCTC GATCTCCGGC TATCATATGC AGGAGGCGGG CGCGACGCTG
GTGCAGGAAC TTGCCTTCAC GCTTGCCGAT GGCCGTGAAT ATGTGCGGGC AGCGCTGGCC
AAGGGCCTGG ATGTCGATGC CTTCGCAGGC CGGCTGTCGT TCTTCTTCGC CATTGGCATG
AATTTCTTTA TGGAAGCGGC AAAACTACGG GCCGCCCGGC TGCTGTGGAC CCGGATCATG
CAGGAATTTA ACCCCAAAAA GCCCGCCTCG CTGATGCTGC GCACCCATTG TCAGACGTCA
GGCGTATCGC TGGCCGAGCA GGACCCGTAT AACAACATTG TCCGCACCGC TTTTGAGGCG
ATGTCGGCAG TGCTGGGCGG CACGCAATCG CTGCATACCA ATTCCTTCGA TGAAGCCATA
GCGCTTCCCA CCGAGTTCTC CGCGCGCATT GCCCGCAATA CCCAGCTGAT CTTGCAGCAT
GAAACCGGCG TGACCAAGGT GGTCGATCCG CTGGCTGGCT CTTACTATGT CGAAAGCCTG
ACCAAGGAAC TGGCGGATGC GGCCTGGGCA CTGATCGAAG AAGTGGAAAG CCTGGGTGGC
ATGACCAAGG CGGTGGCTGA CGGCCTGCCC AAACGCCTGA TCGAGGAGGC CGCCACCCGC
CGCCAGGCGG CTGTGGACCG CCGCGAGGAG GTGATCGTTG GCGTCAACAA ATACCGGCTG
GAAACCGAAG ACGAGATCGA CATTCTCGAT ATCGACAATG CCACTGTCCG TCTTGGCCAG
ATCAAGCGCC TTGAAGACAC CAAGCGCCGC CGGGATGTAA AAACGGTGGA GGCGAGCCTG
GTGGAGATGA CCCGCATTGC CAAAACAGGA GAGGGCAATC TCTTGGCCGC CGCCGTTGAT
GCCGCCCGCG CCCGTGCCAC CGTGGGCGAA ATATCGGATG CCATGCGGTC GGTGTTTGGC
GATCACACTG CCGTGCCCAA AGTGGTATCC AAGGTCTACG GCGACCGCTA TCACGATGAT
CCAGAATATC AGACGCTTGT CGGCCAGCTA TCTGACTTTG CCACAGTGCT GGGGGGCAAG
CCGAAGATCA TGGTGGCCAA GCTTGGCCAG GATGGCCATG ACCGGGGTGC GAAAGTCATT
TCCTCGGCGT TTGGCGATAT CGGCTTTGAT GTCATTGCCG GTCCGTTGTT CCAGACCCCG
GAGGAAACCG CCGATCTGGC CGTCAGCCAC AAGGTTCAGG TCGTCGGCAT GTCCTCGCTG
GCGGCTGGCC ATAAAACGCT TGCGCCACAA CTGGTTGCTG CACTCAAGGC CAAAGGCGCG
GAAAACATCA TCGTCGTGGT TGGCGGTGTG ATCCCAAGAC AGGATTATCA GTTCCTCCTC
GACCACGGCG TCGCAGCCGT CTTCGGACCT GGAACAAACG TGCTGGAGGC CGCAAGAGCC
GTCATCAATC TTATGCAGGG TCGGTTGCGA AACCAGTAA
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| Protein sequence | MSKKTVADWQ SLAEKELKAN PDSLTWQTPE GIAVKPLYTA DDLAGMDHLD SLPGFAPFTR
GPRATMYAGR PWTIRQYAGF STAEASNAFY KRNLAAGQKG LSVAFDLATH RGYDSDHSRV
EGDVGKAGVA IDSVEDMKIL FDGIPLDEMS VSMTMNGAVI PILASFIVAG EEQGVSRDKL
SGTIQNDILK EFMVRNTYIY PPEPSMRIVA DIIDYTAREM PKFNSISISG YHMQEAGATL
VQELAFTLAD GREYVRAALA KGLDVDAFAG RLSFFFAIGM NFFMEAAKLR AARLLWTRIM
QEFNPKKPAS LMLRTHCQTS GVSLAEQDPY NNIVRTAFEA MSAVLGGTQS LHTNSFDEAI
ALPTEFSARI ARNTQLILQH ETGVTKVVDP LAGSYYVESL TKELADAAWA LIEEVESLGG
MTKAVADGLP KRLIEEAATR RQAAVDRREE VIVGVNKYRL ETEDEIDILD IDNATVRLGQ
IKRLEDTKRR RDVKTVEASL VEMTRIAKTG EGNLLAAAVD AARARATVGE ISDAMRSVFG
DHTAVPKVVS KVYGDRYHDD PEYQTLVGQL SDFATVLGGK PKIMVAKLGQ DGHDRGAKVI
SSAFGDIGFD VIAGPLFQTP EETADLAVSH KVQVVGMSSL AAGHKTLAPQ LVAALKAKGA
ENIIVVVGGV IPRQDYQFLL DHGVAAVFGP GTNVLEAARA VINLMQGRLR NQ
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