| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5668 |
|---|
| Symbol | bioA |
|---|
| ID | 7381137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011988 |
|---|
| Strand | - |
|---|
| Start bp | 690860 |
|---|
| End bp | 692233 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643649231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002547468 |
|---|
| Protein GI | 222106677 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGCA ATTCTCTTAT TGAGTTGGAC CGCGCCCATC TGGTGCATCC GGTTGCCTCC
TATCGCAGCC ATGAAAAAGC TGGCGTGCGC GTTCTGAAAT CGGCCAGCGG CGCAACCGTC
ACTGATTCCA CCGGACGTCA ACTGCTCGAC GGCTTTGCCG GTCTGTGGTG CGTGAATGCC
GGTTACGGCC AGGAAAGCAT TATCGAGGCA GCAACCAAGC AGTTGCGTGA ACTGCCTTAC
GCCACCGGCT ATTTCAGCCT CGGCTCGGAA CCCGCCATCC GGCTGGCTGC CGAACTGGCT
GACCGGGCAC CCGGCGATCT CAACCACGTC TATTTCACTC TGGGCGGCTC AGACGCTATC
GACAGCACCA TCCGCTTCAT CCGTTATTAC TACCATTGCA AAGGCACACC GCAGAAGGAC
CAGTTCATCT CGGTGGAACA GGGCTATCAT GGCTCATCCA CGGTCGGCGC AGGCCTGACG
GCTCTGCCGC TGTTCCACGC CGGGTTCGGC CTGCCATTTG ACTGGCAGCA TAAAATTCCG
TCGCACTACG CCTATCGCAA CCCGGTCGGC AATGATCCCG CCGCTATTAT CGCTTCATCG
GTTGCCGCCT TGCGGGCAAA GGTTGAGGAA CTGGGTGCAG AGCGTGTGGC CGCTTTTTAT
GTGGAGCCAA TTCAAGGCTC CGGCGGCGTG ATTGTTCCGC CAGATGGCTG GCTAAAAGCC
ATGCGCGATG TCTGCACCGA GCTGGACATT CTGTTCGTGG CCGATGAAGT CATCACCGGC
TTTGGCCGCA CCGGGCCGTT GTTTGCCTGT GCCGATGATG GCGTGGTGCC GGATCTGATG
ACCACCGCCA AGGGCCTCAC CTCTGGCTAT GTGCCGATGG GTGCGGTGTT CCTGTCCGAT
ACAATCTACA ACACCATTGC CGATGGTGCC GGATCAGCCG CCATTGGCCA TGGCTATACC
TATTCGGCCC ATCCGGTCAG TGCCGCTGTT GGCCTTGCCG TGCTGAAGCT TTACGAAGAC
GGCTTGCTGG ACAACGGCCG CAAAATGGGC GCACGTTTGA TTGCGGGCTT GGAAAGCCTG
AAAGACCACC CGCTGGTGGG CGATGTGCGC GGTCGTGGCA TGCTGGCCGC CATTGAAATG
GTGGTGGACA AGGATAAGAA AACCCCTCTG CCAGCCGCTG CTGCCCCCGC CACCCGGGTG
TTTGAACGCG CCTGGGACAA TGGCCTTGTC ATCCGCGCCT TTGCCAATGG CATTCTGGGC
TATGCGCCGC CGCTGTGCTG CACGGAAAGC GAAATCGACG CCATTGTCGA GCGCACCAAA
AAGACGCTGG ATCAGACGCT GGAAGATCCG GACGTTCGCA CTGCCATGGC CTGA
|
|---|
| Protein sequence | MLSNSLIELD RAHLVHPVAS YRSHEKAGVR VLKSASGATV TDSTGRQLLD GFAGLWCVNA
GYGQESIIEA ATKQLRELPY ATGYFSLGSE PAIRLAAELA DRAPGDLNHV YFTLGGSDAI
DSTIRFIRYY YHCKGTPQKD QFISVEQGYH GSSTVGAGLT ALPLFHAGFG LPFDWQHKIP
SHYAYRNPVG NDPAAIIASS VAALRAKVEE LGAERVAAFY VEPIQGSGGV IVPPDGWLKA
MRDVCTELDI LFVADEVITG FGRTGPLFAC ADDGVVPDLM TTAKGLTSGY VPMGAVFLSD
TIYNTIADGA GSAAIGHGYT YSAHPVSAAV GLAVLKLYED GLLDNGRKMG ARLIAGLESL
KDHPLVGDVR GRGMLAAIEM VVDKDKKTPL PAAAAPATRV FERAWDNGLV IRAFANGILG
YAPPLCCTES EIDAIVERTK KTLDQTLEDP DVRTAMA
|
|---|
| |