| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5666 |
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| Symbol | |
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| ID | 7381135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 688199 |
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| End bp | 689812 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649229 |
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| Product | ABC transporter substrate binding protein (oligopeptide) |
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| Protein accession | YP_002547466 |
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| Protein GI | 222106675 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA AGCAGACGAC AAACTGGACC GGCGCTGACG ATGCCATGGT GGAAAACGCC
ATTCGCCGTG GTGCCACCCG CCGCGAACTG ATGCAGATGA TGCTGGCTGG TGGCGTTGCC
CTCACCGCCG CCGGCTCCAT CATGGGCCGC GCCTCAAGCG CGCTGGCCGC AACGCCGGTC
AAGGGCGGAT CTTTGAAAGC CGCCGGCTAC TCTGCCTCCA ATGCCGATAC GCTGGACCCG
GCCAAGGCCT CGCTTTCCAC CGACTATGTG CGCTGCTGCG CGCTCTATAA CCGTTTGACC
ATTCTCGACA AGTCCGGCGC CCCACAGATG GAGCTGGCAG AATCGGTTGA AAGTAAGGAC
GCTCAGGTCT GGACCATCAA GCTGAAAAGC GGCGTGACCT TCCACGACGG TAAGACGCTG
ACCGCAGACG ACGTGGTCTA TTCGCTGAAG CGCCATCTCG ACCCGGCCAC CGGCTCCAAG
GTTGCCAAGA TCGCCGCCCA GATGACCGGC ATCAAGGCCG TCGACAAGCA GACCGTGGAA
ATCTCCCTGG CGCATGCCAA TGCTGACATG CCGTCCATTC TCGCCATCCA TCAGTTCATG
ATCGTTGCCG ATGGCACCAA GGATTTCTCC AAGGGCAATG GCACCGGTGC CTTCGTTCTC
GAAAAATTCG AGCCCGGCGT CCGCTCGATC ATGAAGCGCA ATGGCAATTA CTGGAAAGCT
GGCGGCCCGA ATGTCGACAG TTTCGAATTT TTCGCCATCA GCGAGGACAA TGCCCGTGTC
AACGCGCTCC TGTCGGGTGA CATCCAACTG GCCGCCTCCA TCAATCCGCG CTCCATGCGT
CTGGTCGATA CCCAGGACGG CTTCGTGCTG TCGAAGACGA CATCGGGCAA TTACACCAAT
CTCAACATGC GCATGGACAT GGCGCCGGGC AATAAGAAAG ACTTCATCGA CGGCATGAAG
CTGATCGTTA ACAGGGAGCA GATCGTCAAA TCCGCATTGC GTGGGCTGGG CGAAGTCGGC
AACGACCAGC CGCTGTCGTC TGCCAGCTTC TATCATAATG CCGACCTGAA GCCGAAGGCC
TTCGATCCCG ACAAGGCAAA ATTCCACTTC CAGAAGGCGG GCGTGCTTGG CCAGTCCATC
CCGGTTATCG CATCAGAAGC CGCAAGCTCT TCGATAGACA TGGCGATGAT TATCCAGGCA
TCGGCGGCAG AAATCGGCAT GAAGCTCGAT GTCCAGCGCG TACCCTCCGA TGGTTATTGG
GACAAATACT GGTTGAAGGC ACCGGTCCAT TTCGGCAATA TCAACCCACG TCCAACACCA
GATATCCTGT TCTCGCTGCT CTATTCTTCC GATGCTCCGT GGAACGAAAG CCAGTATAAG
TCGCCGAAAT TCGACAAGAT GCTGCTCGAA GCTCGTGGCC TTCTCGATCA GGCCAAGCGC
AAGGAAATCT ATGGCGAAAT GCAGGTGATG ATCGCAGAGG AAGCAGGGAC GGTTATTCCC
GCCTATCTTT CCAATGTCGA TGCCATCACC GCCAAGCTGA AAGGGCTTGA ACCCAGCCCG
CTGGGTGGCA TGATGGGTTA TGCCTTCGCC GAATATGTCT GGCTGGAAGC CTGA
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| Protein sequence | MTDKQTTNWT GADDAMVENA IRRGATRREL MQMMLAGGVA LTAAGSIMGR ASSALAATPV
KGGSLKAAGY SASNADTLDP AKASLSTDYV RCCALYNRLT ILDKSGAPQM ELAESVESKD
AQVWTIKLKS GVTFHDGKTL TADDVVYSLK RHLDPATGSK VAKIAAQMTG IKAVDKQTVE
ISLAHANADM PSILAIHQFM IVADGTKDFS KGNGTGAFVL EKFEPGVRSI MKRNGNYWKA
GGPNVDSFEF FAISEDNARV NALLSGDIQL AASINPRSMR LVDTQDGFVL SKTTSGNYTN
LNMRMDMAPG NKKDFIDGMK LIVNREQIVK SALRGLGEVG NDQPLSSASF YHNADLKPKA
FDPDKAKFHF QKAGVLGQSI PVIASEAASS SIDMAMIIQA SAAEIGMKLD VQRVPSDGYW
DKYWLKAPVH FGNINPRPTP DILFSLLYSS DAPWNESQYK SPKFDKMLLE ARGLLDQAKR
KEIYGEMQVM IAEEAGTVIP AYLSNVDAIT AKLKGLEPSP LGGMMGYAFA EYVWLEA
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