| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5663 |
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| Symbol | |
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| ID | 7381134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 687062 |
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| End bp | 688018 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649228 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547465 |
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| Protein GI | 222106674 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGTGA ACGCCCGAGC CTTTTCCCTT GTTGTCAACA GGCTGATGAT CGCCCTGATC
ACCTTGATCA TCGTGTCGCT GGCCGTTTTC ATGGCGACTG CGCTCTTGCC AGGCGATACG
GCGACCATGC TGCTCGGTCA GGCCGCGACA CCGGAAGCCG TCGAGGGCCT GCGTCGGGCC
ATGCATCTCA ACGATCCCGC AATCTTGCGT TTCCTGCGTT GGGCAACGGG CTTGTTGCAA
GGCGATCTCG GCACGTCCTA TGCCAATAAC ATGCCGATTG CTGAGCTGAT TTCCGGCCGT
CTGGTCAATT CCATGAAGCT TGCCGGCATT ACCGCCCTCC TGGCTGTTCC CATCGCACTG
ACGCTGGGTA TTACCTCGGC CATGCTGCGC GGCTCTCTCT ATGACCGCTG CGTCACCGTG
GTGACCATTG GGGTGATTTC CGTGCCGGAA TTCATGATTG CCACCTCTGC CGTTCTGCTG
TTTGCGGTCT ATCTGAAATG GCTGCCAGCG CTGTCCTTTG CCAATGAGGT TCACACATTT
GCTGGCCTGG TGCGCGTCTA TGCCATGCCC GTCATCACCC TGACCTTCGG CGTTTCAGCC
CAGATGATCC GCATGACCCG GGCAGCTGTG ATCGAAACCC TCGATACGCC CTATGTGGAA
ATGGCGTTGC TGAAAGGCGC CTCACGCCGC CGCATCGTGC TGCGCCATGC GCTGCCCAAT
GCGCTGGGGC CAATCGTCAA TGCCATGGCG CTATCACTGT CCTATCTGAT CGGCGGGGTC
ATTATCGTCG AGACGATCTT CAACTATCCC GGCATTGCCA AGCTGATGGT CGATGCCGTC
GCCACCCGTG ACCTGCCGCT GATCCAGAGC TGCGCGATGA TCTTCTGCGT CGGCTATCTC
GTGTTGATCA CCATTGCCGA TATCGTTTCC ATTCTCTCCA ATCCGAGGCT GCGATGA
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| Protein sequence | MCVNARAFSL VVNRLMIALI TLIIVSLAVF MATALLPGDT ATMLLGQAAT PEAVEGLRRA
MHLNDPAILR FLRWATGLLQ GDLGTSYANN MPIAELISGR LVNSMKLAGI TALLAVPIAL
TLGITSAMLR GSLYDRCVTV VTIGVISVPE FMIATSAVLL FAVYLKWLPA LSFANEVHTF
AGLVRVYAMP VITLTFGVSA QMIRMTRAAV IETLDTPYVE MALLKGASRR RIVLRHALPN
ALGPIVNAMA LSLSYLIGGV IIVETIFNYP GIAKLMVDAV ATRDLPLIQS CAMIFCVGYL
VLITIADIVS ILSNPRLR
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