| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5655 |
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| Symbol | amiF |
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| ID | 7381127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 679220 |
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| End bp | 680236 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649221 |
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| Product | formamidase |
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| Protein accession | YP_002547458 |
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| Protein GI | 222106667 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGAT TGGGCGGATT GAACAAATCG GAACACGGCG TCGGCATTGG ACTCGTGCAG
CTACAACTTC CCGTCACCGT GACACCGCAG GATCTGGCCC GCCAGACCCA GGTGATCGTC
GATCTCGTGG CCAAAGCCCG GCGCAACCAA CCGGGCATGG ATCTGGTGGT ATTTCCCGAA
TATGCCCTGC ACGGCCTTTC GATGGATATC AACCCTGATA TTATGTGCCG GATGGATGGG
CCGGAAGTGG CCGCCTTCAA GGCTGCCTGC AAACAGAACC GCATTTGGGG CTGTTTCTCG
ATCATGGAAT ATAATCCCGG CGGCATGCCC TATAATTCCG GCATTATCAT CGACGATACC
GGCGCGCTGA AGCTCTATTA CCGCAAGATG CATCCGTGGG TGCCAGTCGA GCCATGGGAG
CCGGGCGATC TCGGCATTCC CGTCATCGAC GGGCCGAAGG GTGCCAAGCT GGCGCTGATC
ATCTGCCACG ACGGCATGTT CCCCGAAATG GCGAGGGAAT GCGCCTATAA GGGCGCCGAA
ATCATGATCC GCACGGCAGG CTATACCGCA CCGATCCGCG AATCCTGGCG CTTCACCAAC
CAGTCCAACG CTTTCTGCAA TCTGATGGTC ACAGCCAATG TCTGCATGTG CGGTTCGGAC
GGCACATTCG ACAGCATGGG CGAAGGGATG ATCTGCAATT TCGACGGCTC GATCATCGCC
CACGGCACAT CAGGCCGTGT CAACGAGATC ATTACCGCCG AGGTCCGGCC CGATCTGGTG
CGTGAGGCGC GGCTGGGCTG GGGTGTGGAA AACAACATCT ACCAGCTGGG CCATCGCGGC
TATGTGGCAG TCGCTGGCGG CGCGCAGGAT GCGCCCTACA CTTACATGCA CGACCTGGCA
GCAGGCCGCT ATCGCCTGCC CTGGGAAGTC GAGGTGAAGA TCACCGACGG CACAGCCTGC
GGCTTTGAAA AACCCACCCG CCTCTACGGC AAGCCTGCCA AATCCGCCGC CGAATAG
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| Protein sequence | MNGLGGLNKS EHGVGIGLVQ LQLPVTVTPQ DLARQTQVIV DLVAKARRNQ PGMDLVVFPE
YALHGLSMDI NPDIMCRMDG PEVAAFKAAC KQNRIWGCFS IMEYNPGGMP YNSGIIIDDT
GALKLYYRKM HPWVPVEPWE PGDLGIPVID GPKGAKLALI ICHDGMFPEM ARECAYKGAE
IMIRTAGYTA PIRESWRFTN QSNAFCNLMV TANVCMCGSD GTFDSMGEGM ICNFDGSIIA
HGTSGRVNEI ITAEVRPDLV REARLGWGVE NNIYQLGHRG YVAVAGGAQD APYTYMHDLA
AGRYRLPWEV EVKITDGTAC GFEKPTRLYG KPAKSAAE
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