Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5654 |
Symbol | |
ID | 7381126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 678510 |
End bp | 679211 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649220 |
Product | hypothetical protein |
Protein accession | YP_002547457 |
Protein GI | 222106666 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGT CCACAGAGAC AAAATTTCAC ACGCTTGCCG CCGATCCCTA TCCCTGGCCC TATAATGGCG ATTGGCGGCC GGATAATACC GCGCTCATCA TCATCGACAT GCAGACCGAT TTCTGCGGCC CCGGCGGCTA TGTCGATCAC ATGGGTTATG ACCTGTCGCT GGTGCGCGCA CCGATCGAGC CGATCAAGGC AGTGCTGGCA GCGATGCGGG CCAAGGGCTA CCACATCATC CACACCCGCG AAGGCCATCG CCCTGACCTC GCCGACCTGC CCGCCAACAA GCGCTGGCGC TCGCAACGCA TCAAGTCCGG CATCGGCGAT CCCGGCCCCT GCGGCCGTAT TCTGGTGCGT GGCGAGCCGG GCTGGAACAT TATCGAGGAA CTGGCTCCGC TGGACGGTGA AACCATTATC GACAAGCCCG GCAAGGGCTC TTTCTGCGCC ACCGATCTCG AACTGATCCT CAATCAGAAG CACATCCAGA ATATCATCCT CACCGGCATC ACCACCGATG TCTGTGTGCA CACCACGATG CGCGAGGCCA ATGACCGGGG CTTTGAATGC CTGCTGCTGG AAGATTGCTG CGGCGCAACT GATTACGGCA ATCACCTCGC CGCCATCAAG ATGGTGAAAA TGCAGGGCGG CGTGTTCGGC GCGGTCTCCA ATTCGAAAGA CCTGATTGAG GCCCTACCGT GA
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Protein sequence | MDMSTETKFH TLAADPYPWP YNGDWRPDNT ALIIIDMQTD FCGPGGYVDH MGYDLSLVRA PIEPIKAVLA AMRAKGYHII HTREGHRPDL ADLPANKRWR SQRIKSGIGD PGPCGRILVR GEPGWNIIEE LAPLDGETII DKPGKGSFCA TDLELILNQK HIQNIILTGI TTDVCVHTTM REANDRGFEC LLLEDCCGAT DYGNHLAAIK MVKMQGGVFG AVSNSKDLIE ALP
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