Gene Avi_5654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5654 
Symbol 
ID7381126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp678510 
End bp679211 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID643649220 
Producthypothetical protein 
Protein accessionYP_002547457 
Protein GI222106666 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGT CCACAGAGAC AAAATTTCAC ACGCTTGCCG CCGATCCCTA TCCCTGGCCC 
TATAATGGCG ATTGGCGGCC GGATAATACC GCGCTCATCA TCATCGACAT GCAGACCGAT
TTCTGCGGCC CCGGCGGCTA TGTCGATCAC ATGGGTTATG ACCTGTCGCT GGTGCGCGCA
CCGATCGAGC CGATCAAGGC AGTGCTGGCA GCGATGCGGG CCAAGGGCTA CCACATCATC
CACACCCGCG AAGGCCATCG CCCTGACCTC GCCGACCTGC CCGCCAACAA GCGCTGGCGC
TCGCAACGCA TCAAGTCCGG CATCGGCGAT CCCGGCCCCT GCGGCCGTAT TCTGGTGCGT
GGCGAGCCGG GCTGGAACAT TATCGAGGAA CTGGCTCCGC TGGACGGTGA AACCATTATC
GACAAGCCCG GCAAGGGCTC TTTCTGCGCC ACCGATCTCG AACTGATCCT CAATCAGAAG
CACATCCAGA ATATCATCCT CACCGGCATC ACCACCGATG TCTGTGTGCA CACCACGATG
CGCGAGGCCA ATGACCGGGG CTTTGAATGC CTGCTGCTGG AAGATTGCTG CGGCGCAACT
GATTACGGCA ATCACCTCGC CGCCATCAAG ATGGTGAAAA TGCAGGGCGG CGTGTTCGGC
GCGGTCTCCA ATTCGAAAGA CCTGATTGAG GCCCTACCGT GA
 
Protein sequence
MDMSTETKFH TLAADPYPWP YNGDWRPDNT ALIIIDMQTD FCGPGGYVDH MGYDLSLVRA 
PIEPIKAVLA AMRAKGYHII HTREGHRPDL ADLPANKRWR SQRIKSGIGD PGPCGRILVR
GEPGWNIIEE LAPLDGETII DKPGKGSFCA TDLELILNQK HIQNIILTGI TTDVCVHTTM
REANDRGFEC LLLEDCCGAT DYGNHLAAIK MVKMQGGVFG AVSNSKDLIE ALP