| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5652 |
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| Symbol | |
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| ID | 7381124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 675929 |
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| End bp | 677455 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649218 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar/ribonucleotide) |
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| Protein accession | YP_002547455 |
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| Protein GI | 222106664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.027963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCA GCGGAAGTGC CATCTGCATC GAGACCGCCG CCATGACCAT GCGGTTCGGC
AGCTTCACCG CCCTCGATGC CGTCTCCATC AAGGTGCAGG CCGGTTCGTT TCACGCCCTG
CTGGGAGAAA ACGGCGCGGG CAAATCGACG CTGGTCAAGT GCATCATGGG CTTTTACCGC
CAGACCTCAG GCCAATTGCT GGTCGAGGAC CGGGAAGTGG AGATCGCCTC GCCCCGCGAT
GCGGCAGCGC TAGGGCTTGG CATGGTCTAC CAGCATTTCA CGCTCGTGCC GTCACTGACC
GGCGCGGAAA ATCTGGTCAT CAGCCGCAAT GCCGTGCCTG CGATGATCAA CTGGCGGCGA
GAGCGCCAAG CGCTCAACGA TTTCATGGCG ACCATGCCCT TCCAGATCCC GCTGGAGCGC
CCGGTGCGGG AACTGTCGGC GGGCGAAAAG CAGAAGCTGG AAATCATCAA ACAGCTCTAT
CTCGGACGCC GGTTCCTGAT CCTCGACGAG CCGACATCGG TGCTGACCCC CGCCGAGGCG
GATGACATGC TGGGCCTGGT GCGGAGCATG ACCGAGCGCG GCGCGCTGAC CGTGCTGATG
ATTTCCCACA AATTCCACGA GGTGCGCAAA TTCGCCGATG CCGTGTCGGT GCTGCGGCGT
GGCAAGCTGG TCGGCTCAGG CCGCACAGCA GACCTGACGA CGCAGGAGAT GGCGGCGATG
ATGATCGGCG ATGTCAAACT GGCCGAGCTG GACAGCCGCT TGCCGGTCGT GGAAGCAAGC
CCTTCCATCC TGTCGATCCG GGGTATGAAA ACCCGTGATC GCAGTGGTTT GAAGAGCATC
GAGGTCGATG ATCTCAAGGT CAGAGCTGGC GAAATCGTCG GGATTGCCGG CATTTCCGGC
AATGGCCAGA AGGAATTGGC CGAAGTGCTG GCCGGGCAAC GGCCTGCCGA GGCGGGCGAC
ATCACCGTCA AGGACCGGCC CTATACGGCT ACCCGTCAGG AAACGCGGGC CGCCAATGTT
CGCTTCATCC CCGAAGAACC GCTGCTGAAT GCCTGTGCGC CGAGAATGTC GGTGGCTGAG
AACTTGAGTT TTCGGGATTT CGATGTGGAT GCCAAGGGAA AAACCCGGTT CTGGTTGAAT
GCCAAGGCGA TGCGCGAGAC AGCCGGGCGG CTGATTGCCG ATTTCAAGGT CAAGACAGCC
TCTCCCGCCT CGCCGATTGC CTCACTGTCG GGCGGCAATG TGCAGCGCGC CGTGCTGGCG
CGGGAGCTAA CCGGCGATGT CGATCTACTG GTTGTCTCCA ATCCATGCTT TGGTCTGGAT
TTTTCCGCCG TCGCCGAAAT CCGCGCCCGG ATAATGAAGG CGCGCAACAA TGGCAGCGCC
GTGCTGCTGT TCTCCGAGGA TCTGGACGAG TTGATGGAGA TGTCCGACCG CATTGTCGTG
ATGTCGGATG GCAGGCTGGT TTACGAGACC CCGGCGCGCG GCGCCGACAT TGCCGTGATC
GGCGCCCATA TGGCAGGACA TGCATGA
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| Protein sequence | MKPSGSAICI ETAAMTMRFG SFTALDAVSI KVQAGSFHAL LGENGAGKST LVKCIMGFYR
QTSGQLLVED REVEIASPRD AAALGLGMVY QHFTLVPSLT GAENLVISRN AVPAMINWRR
ERQALNDFMA TMPFQIPLER PVRELSAGEK QKLEIIKQLY LGRRFLILDE PTSVLTPAEA
DDMLGLVRSM TERGALTVLM ISHKFHEVRK FADAVSVLRR GKLVGSGRTA DLTTQEMAAM
MIGDVKLAEL DSRLPVVEAS PSILSIRGMK TRDRSGLKSI EVDDLKVRAG EIVGIAGISG
NGQKELAEVL AGQRPAEAGD ITVKDRPYTA TRQETRAANV RFIPEEPLLN ACAPRMSVAE
NLSFRDFDVD AKGKTRFWLN AKAMRETAGR LIADFKVKTA SPASPIASLS GGNVQRAVLA
RELTGDVDLL VVSNPCFGLD FSAVAEIRAR IMKARNNGSA VLLFSEDLDE LMEMSDRIVV
MSDGRLVYET PARGADIAVI GAHMAGHA
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