| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5649 |
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| Symbol | |
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| ID | 7381121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 673127 |
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| End bp | 674920 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649215 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_002547452 |
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| Protein GI | 222106661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0611258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT CTCAAGCTTT TGATATTGCA TCGCTTCACG CCGCCTATGC CTCTGGCTGG
ACACCACAGG AGATGATCGA AGAGGTATTT TCCCGCATCG CCGCCATCAA CGATCCCGGC
ATCTTCCTTG AGCTTGCCGA CAAAGCGAGC CTGCTGGATC AGGCCCAGGC GCTCGGCGCT
TTTTCGCCGG AGACAAAGCC GCTCTGGGGC ATTCCTTTTG CCGTCAAGGA CAATATCGAT
GTCGCGGGCC TGCCAACCAC CGCTGCCTGC CCGGATTATG CCTATACGCC CGAAATCGAT
GCGACTGTAG TGCGGCTGTT GAAAGACGCG GGTGCCTTGG TGATCGGCAA GACCAATCTC
GACCAGTTCG CCACTGGCCT GGTCGGCGTG CGCACGCCCC ATGCCATTCC CCGCAACGCA
ATTGACCCCA AACTGGTCCC CGGCGGCTCC AGTTCAGGTT CGGCGGTGGC AACGGCGCAG
GGCATTGTCA GCTTCGCGCT CGGCACCGAT ACGGCAGGCT CTGGCCGCAT TCCAGCCGGG
CTGAACAATA TTGTCGGGTT GAAGCCCTCG GTCGGGGCGC TGTCGGCCAC CGGCGTCATC
CCCGCCTGCC GCACCCTCGA TTGCGTGTCG ATCTTCGCGC TGACGGTGGA AGATGCCCAT
AAGGTCTTCA CCGTCGCCGC AAAGCATGAT GCCGCGGACG CATATTCCCG CACCATGCCC
ACCGGCCATG CGTTGGCGTC CGCGCCAGTC CTGCGTATTG GCGTTCCCGC CAAGTCCGAC
CGCGAATTCT TCGGCGACAG CCTTATGGAA GCAAGTTTCG AAAAAGCGCT GGCGGAGCTT
TCGGCCATGG GCCACACGCT CGTGGACCTG CCGTTTTCCG GCTTTTACGA GGTCGCAAAC
CTGCTCTATG AAGGCGCCTG GGTGGCCGAG CGCTATGCGG CGGTCAAGGA ATTTTTCGAT
GCGAAGCCCG AAAGCTTCCA TCCGGTGACG CACAAGATCT ACAGCGCGGC GAAAACCCTG
ACTGCCGCCG ATGCCTTTTC CGGCATGTAC CGCCTGCAAG CATTGAAGCA GCAGTTGGCG
CCGGTGATCG CCTCGGTCGA TGTGATCTGC GTGCCGACAG CACCCACCCA TTACACGTTG
GCCGATCTGG AAGCCGAACC GATCAAGGCC AATTCACGCC TCGGCACCTA TACCAATTTC
GTCAATCTTC TGGACATGTG CGGCATTGCC GTGCCGACCG GAACGCGCAA CGATGGCCTG
CCCTCCAGCG TCACACTCCT GGCACCCTTC GGTGCCGACG GCCTGACCGC AGCACTCGGT
TCAGCCTTGC ACAACCGACT TGGAACCACC ATTGGTGCCA CCGGCTGGCC GCTGCCGCCG
TCACCAGAAA AGCCAGTGGA AAAGGCGGAG GGTCTGATCC CTGTCATCGT TGTCGGCGCG
CATCTGTCCG GCATGCCGCT CAATCACCAA CTGACCAGCC TCAACGCCAG GTTCCTGCGG
GCTGGGACGA CATCGGCCAG CTACAAGCTG TTTGCCCTGC CCAACCAGAC ACCGCCCAAG
CCTGGCCTGG TCCGGGTCGA GCAAGGTGCC GCCATTGCGG TGGAAATCTG GCAGTTGACG
CCCGCTGGCT TCGGCCAGTT CGTCAACATG ATCCCCTCGC CGATGTGTAT CGGCACGGTT
TTCCTGGATG ACGGATCAAG CGCCAAGGGT TTTCTCGTCG AGCCTTCGGC GGTCGAAGGC
GCTGAGGACA TTACGCATTT GGGTGGCTGG CGGGCCTATA TTGCCAGCCT TTGA
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| Protein sequence | MAFSQAFDIA SLHAAYASGW TPQEMIEEVF SRIAAINDPG IFLELADKAS LLDQAQALGA
FSPETKPLWG IPFAVKDNID VAGLPTTAAC PDYAYTPEID ATVVRLLKDA GALVIGKTNL
DQFATGLVGV RTPHAIPRNA IDPKLVPGGS SSGSAVATAQ GIVSFALGTD TAGSGRIPAG
LNNIVGLKPS VGALSATGVI PACRTLDCVS IFALTVEDAH KVFTVAAKHD AADAYSRTMP
TGHALASAPV LRIGVPAKSD REFFGDSLME ASFEKALAEL SAMGHTLVDL PFSGFYEVAN
LLYEGAWVAE RYAAVKEFFD AKPESFHPVT HKIYSAAKTL TAADAFSGMY RLQALKQQLA
PVIASVDVIC VPTAPTHYTL ADLEAEPIKA NSRLGTYTNF VNLLDMCGIA VPTGTRNDGL
PSSVTLLAPF GADGLTAALG SALHNRLGTT IGATGWPLPP SPEKPVEKAE GLIPVIVVGA
HLSGMPLNHQ LTSLNARFLR AGTTSASYKL FALPNQTPPK PGLVRVEQGA AIAVEIWQLT
PAGFGQFVNM IPSPMCIGTV FLDDGSSAKG FLVEPSAVEG AEDITHLGGW RAYIASL
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