| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5646 |
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| Symbol | |
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| ID | 7381119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 670697 |
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| End bp | 671689 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649213 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002547450 |
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| Protein GI | 222106659 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA CCAGTCTTCT CGATATCCGC ATGCTTGCCC GCGACTATAC CAGCCGTCCG
CTGTTCGGAA AGCCGCATAC CAGCCGGGCG CTGGACGAGG TGTCGCTGAC GGTTGGGCGC
GGCGAAATCT ATGGCATTGT CGGCGAAAGC GGCTGCGGAA AATCCACCCT TGCCCGGCTG
GTGATGGCGC TCGACCGTCC AACGTCGGGC CATGTCCTGT TTGACGGCGA CGATCTGTTT
TCACTGTCGC CGGAAGCACT GAAGCGCAAG CGGCAGGCTT TCCAGATGGT GTTTCAGGAC
CCTTTCGGCT CGCTTGATCC GCGCCAGACC ATCGGGCGGA TTATCGCTGA ACCGTTGCAT
GTGCTGACGC CCAGGCCGGG TAAGGCCGCA ATCGGCGAGA AAGTTGCCGC GATGCTGGAA
AGCGTCGGTT TGCAGGCGGG GCATGCGCAG CGTTATCCGC ATGAGTTTTC CGGCGGCCAG
CGCCAGCGGA TCGCCATTGC CCGCGCCCTG ATCACCGAAC CGAAACTTGT CGTGGCCGAT
GAGGCGGTCT CGGCGCTCGA TCTCTCGGTG CAAGGGCAGG TCCTCAACCT GTTGATGGAT
CTGCGCCGCA TACGCGGGGT CAGCTTTCTG TTCATCACCC ATAATCTGGC GGTGGTGGAT
TGTATCGCTG ATCGGGTCGG GGTGATGTAT CGCGGCAGGC TGGTGGAGCA GGGACCGGCC
CATGCGGTCT TCGAGCAGCC CCTGCATCCC TATACGAAAA TTCTGGCCGA TGCCGAGCCA
AGCGTTCACC GTTTCGGCAG GCCGCAAAAG CCTTACCCTC TGCCTGATAT CAGCGGCGAT
CCCGATATTG GCTGCGCGTT CCGTGGCCGC TGTCCACTGG CGCAGACACG CTGCACCATG
GAACAGCCAG CGCTGCGCGA GATCATGCCC GGACGCGAGG CGGCTTGCCA CCGTGCCGAG
GTGATGGCCG GGACCGATAC CTTCATCCGA TAA
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| Protein sequence | MTDTSLLDIR MLARDYTSRP LFGKPHTSRA LDEVSLTVGR GEIYGIVGES GCGKSTLARL
VMALDRPTSG HVLFDGDDLF SLSPEALKRK RQAFQMVFQD PFGSLDPRQT IGRIIAEPLH
VLTPRPGKAA IGEKVAAMLE SVGLQAGHAQ RYPHEFSGGQ RQRIAIARAL ITEPKLVVAD
EAVSALDLSV QGQVLNLLMD LRRIRGVSFL FITHNLAVVD CIADRVGVMY RGRLVEQGPA
HAVFEQPLHP YTKILADAEP SVHRFGRPQK PYPLPDISGD PDIGCAFRGR CPLAQTRCTM
EQPALREIMP GREAACHRAE VMAGTDTFIR
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